RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 J3QRE1 110 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 CDIPTO14735 213 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 NDUFA2O43678 99 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 BAG2O95816 211 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 EGR1P18146 543 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 GABRB1P18505 474 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 ADRA2CP18825 462 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 ATP6V1E1P36543 226 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 RIPPLY1Q0D2K3 151 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 LIPNQ5VXI9 398 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 MEDAGQ5VYS4 303 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 TEX36Q5VZQ5 186 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 WDR25Q64LD2 544 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 Q6ZSR3 168 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 C1QL2Q7Z5L3 287 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 TEX29Q8N6K0 151 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 SEMA6DQ8NFY4 1073 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 RHOXF1Q8NHV9 184 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 NANPQ8TBE9 248 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 RAB40AQ8WXH6 277 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 TBX5Q99593 518 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 ABCB9Q9NP78 766 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 IMPAD1Q9NX62 359 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 SLC22A13Q9Y226 551 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 ZNF816-ZNF321PA0A0X1KG74 233 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 OOEPA6NGQ2 149 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 RNF212BA8MTL3 300 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 LOC110117498-PIK3R3F6TDL0 507 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 SULT1C4O75897 302 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 FSHBP01225 129 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 MTNR1AP48039 350 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 PITPNBP48739 271 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 GNB2P62879 340 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 CSNK2BP67870 215 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 ZNF85Q03923 595 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 KCNJ8Q15842 424 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 CEACAM21Q3KPI0 293 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 ZBTB37Q5TC79 503 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 YIPF7Q8N8F6 280 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 SCCPDHQ8NBX0 429 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 OR10H4Q8NGA5 316 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 OR8B3Q8NGG8 313 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 LRRC29Q8WV35 223 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 HPSE2Q8WWQ2 592 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 TMEM158Q8WZ71 300 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 RORBQ92753 470 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 FAM71F1Q96KD3 344 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 HIST1H2AAQ96QV6 131 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 OR8B2Q96RD0 313 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDLIM5-212ENST00000509333 LOC100130705A0A1B0GUX0 176 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 hCG_1807616A0A1W2PRN6 198 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 TMEM210A6NLX4 147 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 DLGAP1O14490 977 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 SLC16A6O15403 523 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 RPP14O95059 124 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 KRT8P05787 483 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 DMRTC1Q5HYR2 192 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 NLRC3Q7RTR2 1065 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 CATSPERDQ86XM0 798 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 FAM90A1Q86YD7 464 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 ZDHHC23Q8IYP9 409 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 OR5A2Q8NGI9 324 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 OR10Z1Q8NGY1 313 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 OR14K1Q8NGZ2 314 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 SPATA3Q8NHX4 192 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 RPL3LQ92901 407 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 RNFT2Q96EX2 444 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 RTL8AQ9BWD3 113 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 OR51I2Q9H344 312 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 TRIM36Q9NQ86 728 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 ERVK-18Q9QC07 812 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 CLN8Q9UBY8 286 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 PIGLQ9Y2B2 252 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 EXOGQ9Y2C4 368 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 GMPPBQ9Y5P6 360 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 AUP1Q9Y679 476 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 V9GYS6 101 aa13.43□□□□□ -0.26
PDLIM5-212ENST00000509333 IGHV3OR15-7A0A075B7D8 119 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 P2RY10O00398 339 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 MTRF1O75570 445 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 FCN3O75636 299 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 DHRS3O75911 302 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 GYPAP02724 150 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 AMY2BP19961 511 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 ISL1P61371 349 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 KLF17Q5JT82 389 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 ATPAF1Q5TC12 328 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 TMEM42Q69YG0 159 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 MOB3CQ70IA8 216 aa13.42□□□□□ -0.26
PDLIM5-212ENST00000509333 KCTD20Q7Z5Y7 419 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms