RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 RTL8AQ9BWD3 113 aa12.68□□□□□ -0.38
SMAD5-205ENST00000509297 NIPAL2Q9H841 368 aa12.68□□□□□ -0.38
SMAD5-205ENST00000509297 HAO2Q9NYQ3 351 aa12.68□□□□□ -0.38
SMAD5-205ENST00000509297 FAM96BQ9Y3D0 163 aa12.68□□□□□ -0.38
SMAD5-205ENST00000509297 RNF114Q9Y508 228 aa12.68□□□□□ -0.38
SMAD5-205ENST00000509297 A0A1B0GW55 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 FAM183AA6NL82 134 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 ACOT8O14734 319 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 PRODHO43272 600 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 FBP1P09467 338 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 H2BFMP0C1H6 154 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 HOXB6P17509 224 aaKnown RBP12.67□□□□□ -0.38
SMAD5-205ENST00000509297 AMY2BP19961 511 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 PROK1P58294 105 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 GNGT1P63211 74 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 MS4A2Q01362 244 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 SRSF4Q08170 494 aaKnown RBP12.67□□□□□ -0.38
SMAD5-205ENST00000509297 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
SMAD5-205ENST00000509297 FAM216BQ8N7L0 139 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
SMAD5-205ENST00000509297 GIPC3Q8TF64 312 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 RAB3IPQ96QF0 476 aaPredicted RBP12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 MMP27Q9H306 513 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 C16orf95Q9H693 158 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 MED20Q9H944 212 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DNAJC27Q9NZQ0 273 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
SMAD5-205ENST00000509297 H3BN98 237 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 LYNP07948 512 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 ACKR3P25106 362 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 PSMA6P60900 246 aaKnown RBP12.66□□□□□ -0.38
SMAD5-205ENST00000509297 ZNF788Q6ZQV5 615 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.66□□□□□ -0.38
SMAD5-205ENST00000509297 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 IQCF1Q8N6M8 205 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 Q8N7P7 452 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 ASB9Q96DX5 294 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 MED30Q96HR3 178 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 PPP1R3EQ9H7J1 279 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 ZNRD1Q9P1U0 126 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
SMAD5-205ENST00000509297 WNK1Q9H4A3 2382 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 NKX6-3A6NJ46 265 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 ACOD1A6NK06 481 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 PRR23D1E9PI22 279 aaPredicted RBP12.65□□□□□ -0.38
SMAD5-205ENST00000509297 RNASEK-C17orf49H0YIS7 233 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 HMGN1P05114 100 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 PRR23D2P0DMB1 279 aaPredicted RBP12.65□□□□□ -0.38
SMAD5-205ENST00000509297 CALB2P22676 271 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 EEF1B2P24534 225 aaKnown RBP12.65□□□□□ -0.38
SMAD5-205ENST00000509297 DCTDP32321 178 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 CAV3P56539 151 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 KRTAP10-3P60369 221 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
SMAD5-205ENST00000509297 PRDX4Q13162 271 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 TAF9Q16594 264 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 GFOD2Q3B7J2 385 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 MIDNQ504T8 468 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 ANGPTL6Q8NI99 470 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 TNFRSF14Q92956 283 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 OTULINQ96BN8 352 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 SEH1LQ96EE3 360 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 PKP2Q99959 881 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 CHID1Q9BWS9 393 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 OR51V1Q9H2C8 321 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 DNAJB11Q9UBS4 358 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 VPREB3Q9UKI3 123 aa12.65□□□□□ -0.38
SMAD5-205ENST00000509297 BTBD17A6NE02 478 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 ZNF850A8MQ14 1090 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 M0R1W7 72 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 NPFFO15130 113 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 SIGLEC5O15389 551 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 TSPAN9O75954 239 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 CST1P01037 141 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 UBE2E1P51965 193 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 ACSM1Q08AH1 577 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 IKZF1Q13422 519 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 GINS1Q14691 196 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 SLC35D3Q5M8T2 416 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 NCR3LG1Q68D85 454 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 PLBD1Q6P4A8 553 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 DEGS2Q6QHC5 323 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 PDZD9Q8IXQ8 264 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 ZDHHC23Q8IYP9 409 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 PAPD5Q8NDF8 572 aaKnown RBP12.64□□□□□ -0.39
SMAD5-205ENST00000509297 OR5R1Q8NH85 324 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 THEM6Q8WUY1 208 aa12.64□□□□□ -0.39
SMAD5-205ENST00000509297 HPSE2Q8WWQ2 592 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms