RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 C12orf43Q96C57 262 aaKnown RBP3.03□□□□□ -1.92
RNF4-211ENST00000509206 ITCHQ96J02 903 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 SLC25A33Q9BSK2 321 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 TMEM43Q9BTV4 400 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 ALG12Q9BV10 488 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 TMED9Q9BVK6 235 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 SPATA5L1Q9BVQ7 753 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 MRPL13Q9BYD1 178 aaKnown RBP3.03□□□□□ -1.92
RNF4-211ENST00000509206 KRTAP4-5Q9BYR2 181 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 C1orf21Q9H246 121 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 TUBB1Q9H4B7 451 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 PPP1R3EQ9H7J1 279 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 DCLRE1BQ9H816 532 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 PAPOLBQ9NRJ5 636 aaKnown RBP3.03□□□□□ -1.92
RNF4-211ENST00000509206 SNTG1Q9NSN8 517 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 TBC1D23Q9NUY8 699 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 THUMPD1Q9NXG2 353 aaKnown RBP3.03□□□□□ -1.92
RNF4-211ENST00000509206 USE1Q9NZ43 259 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 DCDC2Q9UHG0 476 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 ZNF229Q9UJW7 825 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 SNX12Q9UMY4 172 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 POLR1DQ9Y2S0 133 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 NDUFAF1Q9Y375 327 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 DNAJC15Q9Y5T4 150 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
RNF4-211ENST00000509206 A0A0B4J2E0 115 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 A0A1B0GX12 115 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ANKRD30BLA7E2S9 258 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 F5H5K5 113 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 POLR3GO15318 223 aaPredicted RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 FCN3O75636 299 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 OR8U8P0C7N1 319 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 CPA3P15088 417 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 FUT1P19526 365 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 BGNP21810 368 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 HTR2AP28223 471 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 CCT5P48643 541 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 CENPAP49450 140 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 DYNLT3P51808 116 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ZNF133P52736 654 aaPredicted RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 SLC25A1P53007 311 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 CLNS1AP54105 237 aaKnown RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 UGT2B15P54855 530 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 CDH12P55289 794 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 DNAJB13P59910 316 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 RPL31P62899 125 aaKnown RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 GK2Q14410 553 aaPredicted RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 CASP8Q14790 479 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 SNAPC1Q16533 368 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ZNF74Q16587 644 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 PCK2Q16822 640 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 PNLIPRP3Q17RR3 467 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ARMC4Q5T2S8 1044 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ATPAF1Q5TC12 328 aaPredicted RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 NANOGP8Q6NSW7 305 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 TEX38Q6PEX7 206 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 SLC25A47Q6Q0C1 308 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ZYG11AQ6WRX3 759 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 KRT73Q86Y46 540 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 FOXRED2Q8IWF2 684 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 SLC35F6Q8N357 371 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 DRAM1Q8N682 238 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 OR11H1Q8NG94 326 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 OR2T27Q8NH04 317 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 FBXO25Q8TCJ0 367 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 AGR3Q8TD06 166 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 TCP10LQ8TDR4 215 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 SLC38A5Q8WUX1 472 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 HDAC2Q92769 488 aaKnown RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 SPSB4Q96A44 273 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 TMEM19Q96HH6 336 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 MPP4Q96JB8 637 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 OR14A2Q96R54 314 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 OR4C12Q96R67 309 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 PITX2Q99697 317 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 FAM110AQ9BQ89 295 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 GON7Q9BXV9 100 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 RAB17Q9H0T7 212 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 DNTTIP1Q9H147 329 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 TXNIPQ9H3M7 391 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 RERGLQ9H628 205 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 RNPEPL1Q9HAU8 725 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 SLCO1B3Q9NPD5 702 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 ISYNA1Q9NPH2 558 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 POLE4Q9NR33 117 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 CHCHD3Q9NX63 227 aaKnown RBP3.02□□□□□ -1.93
RNF4-211ENST00000509206 HAO2Q9NYQ3 351 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 BTNL2Q9UIR0 455 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 LINC00527Q9UJ94 153 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.02□□□□□ -1.93
RNF4-211ENST00000509206 UGT2A1Q9Y4X1 527 aa3.02□□□□□ -1.93
RNF4-211ENST00000509206 IGKV1D-43A0A0B4J1Z2 117 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 PRORSD1PA6NEY8 169 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 A6NIZ1 184 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 FAM90A8PA6NJQ4 464 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CD300LBA8K4G0 201 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 C12orf77C9JDV5 145 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 G3V2L1 256 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms