RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 PPWD1Q96BP3 646 aaKnown RBP3.29□□□□□ -1.88
GYPA-205ENST00000508337 HSFY1Q96LI6 401 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 HIST1H4GQ99525 98 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 SLC35A5Q9BS91 424 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 CDCA4Q9BXL8 241 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 TRIM4Q9C037 500 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 C6orf62Q9GZU0 229 aaPredicted RBP3.29□□□□□ -1.88
GYPA-205ENST00000508337 MFSD1Q9H3U5 465 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 ASB7Q9H672 318 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 TMEM38AQ9H6F2 299 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 REEP4Q9H6H4 257 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 TMEM27Q9HBJ8 222 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 C6orf50Q9HD87 102 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 INIPQ9NRY2 104 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 VAPAQ9P0L0 249 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 V9GY05 133 aa3.29□□□□□ -1.88
GYPA-205ENST00000508337 SLC5A10A0PJK1 596 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 HACD1B0YJ81 288 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 IDSB3KWA1 339 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 C9J4A7 227 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 FTCDNL1E5RQL4 147 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 PSMD12O00232 456 aaPredicted RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 CDC7O00311 574 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 KPNA3O00505 521 aaPredicted RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 ACOX3O15254 700 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 HPGDSO60760 199 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 TRAPPC6AO75865 159 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 SLC25A27O95847 323 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 DHFRP00374 187 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 GCGP01275 180 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 CDK1P06493 297 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 LIPCP11150 499 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 SLC2A5P22732 501 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 RPS12P25398 132 aaKnown RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 FOXN2P32314 431 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 SHMT2P34897 504 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 VHLP40337 213 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 GLP1RP43220 463 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 MAGEA12P43365 314 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 RPS10P46783 165 aaKnown RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 AQP5P55064 265 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 BIDP55957 195 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 FAM3AP98173 230 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 SRSF6Q13247 344 aaKnown RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 SLC39A6Q13433 755 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 OXA1LQ15070 435 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 DGUOKQ16854 277 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 SPIN3Q5JUX0 258 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 RESP18Q5W5W9 173 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 NIPAL1Q6NVV3 410 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 DNM1P34Q6PK57 102 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 LRRN1Q6UXK5 716 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 CASP12Q6UXS9 341 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 PLA2G4DQ86XP0 818 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 BLIDQ8IZY5 108 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 VKORC1L1Q8N0U8 176 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 PUSL1Q8N0Z8 303 aaKnown RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 FTMTQ8N4E7 242 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 PRELID2Q8N945 189 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 OR2D3Q8NGH3 330 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 OR51G1Q8NGK1 321 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 NELFBQ8WX92 580 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 TESCQ96BS2 214 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 ZNF488Q96MN9 340 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 MS4A4EQ96PG1 132 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 SCGB3A2Q96PL1 93 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 OR8B4Q96RC9 309 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 PHB2Q99623 299 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 GPR22Q99680 433 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 HOPXQ9BPY8 73 aaPredicted RBP3.28□□□□□ -1.88
GYPA-205ENST00000508337 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 LHX5Q9H2C1 402 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 VCXQ9H320 206 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 TRABDQ9H4I3 376 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 XPNPEP1Q9NQW7 623 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 CYTL1Q9NRR1 136 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 ERVW-1Q9UQF0 538 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 ERGIC3Q9Y282 383 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 ARL2BPQ9Y2Y0 163 aa3.28□□□□□ -1.88
GYPA-205ENST00000508337 ADGRL3Q9HAR2 1447 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 PLEKHH1Q9ULM0 1364 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 USP42Q9H9J4 1324 aaKnown RBP3.27□□□□□ -1.89
GYPA-205ENST00000508337 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 ISPDA4D126 451 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 EFCAB9A8MZ26 197 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 C2orf74A8MZ97 194 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 TMX2-CTNND1H3BSU7 103 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 FGF16O43320 207 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 SHOX2O60902 331 aaPredicted RBP3.27□□□□□ -1.89
GYPA-205ENST00000508337 CLDN11O75508 207 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 TYMSP04818 313 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 CD5P06127 495 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 IDO1P14902 403 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 CBR1P16152 277 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 TBPP20226 339 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 PSMA1P25786 263 aaKnown RBP3.27□□□□□ -1.89
GYPA-205ENST00000508337 CTRLP40313 264 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 UGT2B15P54855 530 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 OR4D2P58180 307 aa3.27□□□□□ -1.89
GYPA-205ENST00000508337 OR10A3P58181 314 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms