RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DNLZQ5SXM8 178 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 RPL7L1Q6DKI1 246 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 POMZP3Q6PJE2 187 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 DHRS11Q6UWP2 260 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 COX15Q7KZN9 410 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 MARCH3Q86UD3 253 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 LHFPL1Q86WI0 220 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 COMMD2Q86X83 199 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 LINC00346Q8IVM7 164 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SULF2Q8IWU5 870 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZFP82Q8N141 532 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 WDSUB1Q8N9V3 476 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CSNK2A3Q8NEV1 391 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR8G5Q8NG78 346 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR13C9Q8NGT0 318 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 GPR119Q8TDV5 335 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF721Q8TF20 911 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 PPP1R14AQ96A00 147 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADIPOR1Q96A54 375 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 NTNG2Q96CW9 530 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 C10orf35Q96D05 121 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CMBLQ96DG6 245 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZDHHC12Q96GR4 267 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 AKR1E2Q96JD6 320 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 C5orf34Q96MH7 638 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CLCC1Q96S66 551 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 PRRX2Q99811 253 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 RTBDNQ9BSG5 229 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADAT1Q9BUB4 502 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 LPAR5Q9H1C0 372 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC35B3Q9H1N7 401 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ARV1Q9H2C2 271 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 NIT2Q9NQR4 276 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 GSN-AS1Q9NRJ2 163 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SERINC1Q9NRX5 453 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CUTCQ9NTM9 273 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SOHLH2Q9NX45 425 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ALKBH4Q9NXW9 302 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 EHFQ9NZC4 300 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR5AC2Q9NZP5 309 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 GSKIPQ9P0R6 139 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 OSGIN2Q9Y236 505 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 RPH3AQ9Y2J0 694 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 STARD10Q9Y365 291 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM96BQ9Y3D0 163 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TP53BP1Q12888 1972 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SCN2AQ99250 2005 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SPTY2D1-AS1A0A0U1RR47 76 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1W2PNV4 684 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1W2PQF6 199 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 CXorf65A6NEN9 183 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 MSGN1A6NI15 193 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 CRYM-AS1A6NIL9 109 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 UMAD1C9J7I0 102 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM157AC9JC47 383 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FTCDNL1E5RQL4 147 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 H0Y8X5 98 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADAP1O75689 374 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 HTR3BO95264 441 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SEMA4FO95754 770 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 DDAH2O95865 285 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGLV1-40P01703 118 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGHG1P01857 330 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PRH1P02810 166 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SERPINA5P05154 406 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SNRNP70P08621 437 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 HOXB5P09067 269 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FBP1P09467 338 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 DANCRP0C864 163 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC2A1P11166 492 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PRF1P14222 555 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF44P15621 663 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF708P17019 499 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FBLP22087 321 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 THBS4P35443 961 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SNCAP37840 140 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GUCA1AP43080 201 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 P2RY1P47900 373 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FASLGP48023 281 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GABRA4P48169 554 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PPM1FP49593 454 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PPT1P50897 306 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 P2RY4P51582 365 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 AFF3P51826 1226 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 CLRN1P58418 232 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SSTP61278 116 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC35A1P78382 337 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 C17orf67Q0P5P2 114 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SRSF5Q13243 272 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ERV3-1Q14264 604 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 RBM39Q14498 530 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 CLINT1Q14677 625 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GNMTQ14749 295 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 KCNMB1Q16558 191 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms