RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 DPAGT1Q9H3H5 408 aa14.34□□□□□ -0.11
DDX41-207ENST00000507900 TAS2R8Q9NYW2 309 aa14.34□□□□□ -0.11
DDX41-207ENST00000507900 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
DDX41-207ENST00000507900 MYEF2Q9P2K5 600 aaKnown RBP14.34□□□□□ -0.11
DDX41-207ENST00000507900 PROCRQ9UNN8 238 aa14.34□□□□□ -0.11
DDX41-207ENST00000507900 ANKRD11Q6UB99 2663 aaPredicted RBP14.33□□□□□ -0.12
DDX41-207ENST00000507900 CDC14BO60729 498 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 RBBP9O75884 186 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 LYZL6O75951 148 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 NRASP01111 189 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 TPOP07202 933 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 CHRM2P08172 466 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 CCNOP22674 350 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 WNT5AP41221 380 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 PER3P56645 1201 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 LHFPL2Q6ZUX7 228 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 CD163Q86VB7 1156 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 GLCCI1Q86VQ1 547 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 NPRL2Q8WTW4 380 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 PIGTQ969N2 578 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 CST11Q9H112 138 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 LPAR5Q9H1C0 372 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 HRASLSQ9HDD0 168 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 KCNN3Q9UGI6 736 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 TUBD1Q9UJT1 453 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 MGAQ8IWI9 3026 aa14.33□□□□□ -0.12
DDX41-207ENST00000507900 WIPF3A6NGB9 483 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 LPLP06858 475 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 MELTFP08582 738 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 P2RY6Q15077 328 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 TBC1D28Q2M2D7 210 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 ZNF260Q3ZCT1 412 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 MRPL21Q7Z2W9 205 aaKnown RBP14.32□□□□□ -0.12
DDX41-207ENST00000507900 ACBD4Q8NC06 268 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 TMEM104Q8NE00 496 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 TNFAIP8L1Q8WVP5 186 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 TMEM59Q9BXS4 323 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 ZNF107Q9UII5 783 aaPredicted RBP14.32□□□□□ -0.12
DDX41-207ENST00000507900 RAXQ9Y2V3 346 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 STARD10Q9Y365 291 aa14.32□□□□□ -0.12
DDX41-207ENST00000507900 A0A0B4J293 547 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 CST4P01036 141 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 NGFP01138 241 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 CSF1P09603 554 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 RBP2P50120 134 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 FUT6P51993 359 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 MTCP1P56278 107 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 PRSS12P56730 875 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 ACTBP60709 375 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 BTG1P62324 171 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 ACTG1P63261 375 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 GUCA2AQ02747 115 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 INTS1Q8N201 2190 aaKnown RBP14.31□□□□□ -0.12
DDX41-207ENST00000507900 FAM89BQ8N5H3 189 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 CSNK2A3Q8NEV1 391 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 OR56B2PQ8NGI1 322 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 OR5L1Q8NGL2 311 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 OR10R2Q8NGX6 335 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 SEH1LQ96EE3 360 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 OBP2BQ9NPH6 170 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 ZNF71Q9NQZ8 489 aaPredicted RBP14.31□□□□□ -0.12
DDX41-207ENST00000507900 NUBP2Q9Y5Y2 271 aa14.31□□□□□ -0.12
DDX41-207ENST00000507900 A0A0A6YYD4 124 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 MPIG6BO95866 241 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 IL2RAP01589 272 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 MT-ND4P03905 459 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 CBR1P16152 277 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 CEACAM8P31997 349 aaPredicted RBP14.3□□□□□ -0.12
DDX41-207ENST00000507900 RPS27AP62979 156 aaKnown RBP14.3□□□□□ -0.12
DDX41-207ENST00000507900 DMRTC1Q5HYR2 192 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 RSBN1Q5VWQ0 802 aaPredicted RBP14.3□□□□□ -0.12
DDX41-207ENST00000507900 ASCL4Q6XD76 172 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 BEND4Q6ZU67 534 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 C1QL2Q7Z5L3 287 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 ZNF610Q8N9Z0 462 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 WDR31Q8NA23 367 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 NAXEQ8NCW5 288 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 BORCS8Q96FH0 119 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 GAL3ST1Q99999 423 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 URM1Q9BTM9 101 aaKnown RBP14.3□□□□□ -0.12
DDX41-207ENST00000507900 TM2D1Q9BX74 207 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 CACNG6Q9BXT2 260 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 PTTG3PQ9NZH4 202 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 SLC7A11Q9UPY5 501 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 SPENQ96T58 3664 aaKnown RBP14.3□□□□□ -0.12
DDX41-207ENST00000507900 DMXL2Q8TDJ6 3036 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 IGKV1-27A0A075B6S5 117 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 IGKV3-15P01624 115 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 TCRBP04435 133 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 HNRNPCP07910 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
DDX41-207ENST00000507900 TRAPPC2P0DI81 140 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 TRAPPC2BP0DI82 140 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 GIFP27352 417 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 HOXC12P31275 282 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 VEGFCP49767 419 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 RAG2P55895 527 aa14.3□□□□□ -0.12
DDX41-207ENST00000507900 MRPL49Q13405 166 aaKnown RBP14.3□□□□□ -0.12
DDX41-207ENST00000507900 PCGF3Q3KNV8 242 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms