RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	HERV-K104	P63124	156 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	MRPS34	P82930	218 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	MEF2D	Q14814	521 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ELOB	Q15370	118 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	EXT1	Q16394	746 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	HIST3H3	Q16695	136 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	PCK2	Q16822	640 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	FAM110C	Q1W6H9	321 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	AMZ1	Q400G9	498 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF658B	Q4V348	819 aa	Predicted RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	SOHLH1	Q5JUK2	328 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	UBE2NL	Q5JXB2	153 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	MRPL54	Q6P161	138 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316		Q6ZTK2	550 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF534	Q76KX8	674 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	TMEM179B	Q7Z7N9	219 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	TMEM173	Q86WV6	379 aa	Predicted RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF280B	Q86YH2	543 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ACOT4	Q8N9L9	421 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZBTB34	Q8NCN2	500 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR5AU1	Q8NGC0	362 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR4K17	Q8NGC6	315 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR4N2	Q8NGD1	307 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	OR52L1	Q8NGH7	329 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF519	Q8TB69	540 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	BRIX1	Q8TDN6	353 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	TWIST2	Q8WVJ9	160 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	FAM3C	Q92520	227 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	DYRK2	Q92630	601 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	MOAP1	Q96BY2	351 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	IMP4	Q96G21	291 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	LMLN	Q96KR4	655 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	TSPAN32	Q96QS1	320 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF607	Q96SK3	696 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	GPA33	Q99795	319 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ARHGDIG	Q99819	225 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ZNF670	Q9BS34	389 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	RAB11FIP5	Q9BXF6	653 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	FGFBP2	Q9BYJ0	223 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	SPATC1L	Q9H0A9	340 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	NELFA	Q9H3P2	528 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	RPF1	Q9H9Y2	349 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	CDH20	Q9HBT6	801 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	POPDC3	Q9HBV1	291 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	SLC2A4RG	Q9NR83	387 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	MRPL16	Q9NX20	251 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	CLN8	Q9UBY8	286 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	JPT1	Q9UK76	154 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	RNF150	Q9ULK6	438 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	CFAP20	Q9Y6A4	193 aa	Known RBP	4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	FRMPD3	Q5JV73	1810 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	ARID2	Q68CP9	1835 aa		4.53	□□□□□ -1.68
TUSC3-205	ENST00000507316	UBR2	Q8IWV8	1755 aa		4.53	□□□□□ -1.69
TUSC3-205	ENST00000507316	TRAV1-2	A0A0B4J238	106 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	TRAV38-1	A0A0B4J264	116 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	GAGE12B	A1L429	117 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	C17orf105	B2RV13	164 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	PATE3	B3GLJ2	98 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	P2RX6	O15547	441 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	LAT	O43561	262 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	PCDH7	O60245	1069 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	RAMP2	O60895	175 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	ARL6IP5	O75915	188 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	GJB5	O95377	273 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	NUDT3	O95989	172 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	JCHAIN	P01591	159 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	OMG	P23515	440 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	ATP6V0C	P27449	155 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SERPINA4	P29622	427 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	MIP	P30301	263 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	ADORA1	P30542	326 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	GABRA3	P34903	492 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	APLNR	P35414	380 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	ARL2	P36404	184 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SOX3	P41225	446 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	VIPR2	P41587	438 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	GNG4	P50150	75 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	HNRNPA3	P51991	378 aa	Known RBP	4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	RABGGTB	P53611	331 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SLC16A1	P53985	500 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	PNLIPRP1	P54315	467 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	HMGCS2	P54868	508 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SNU13	P55769	128 aa	Known RBP	4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	H2BFS	P57053	126 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	MLF1	P58340	268 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SMIM11A	P58511	58 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	LILRA4	P59901	499 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	NANOS3	P60323	173 aa	Known RBP	4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	UBE2M	P61081	183 aa	Known RBP	4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SRSF2	Q01130	221 aa	Known RBP	4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	SLC25A11	Q02978	314 aa	Known RBP	4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	AKR1C1	Q04828	323 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	GAGE5	Q13069	117 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	GAGE6	Q13070	117 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	OLIG2	Q13516	323 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	RAB30	Q15771	203 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	UPP1	Q16831	310 aa		4.52	□□□□□ -1.69
TUSC3-205	ENST00000507316	ARHGAP11B	Q3KRB8	267 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms