RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 TLNRD1Q9H1K6 362 aa17.27■□□□□ 0.36
SQSTM1-210ENST00000506042 NIPAL2Q9H841 368 aa17.27■□□□□ 0.36
SQSTM1-210ENST00000506042 hCG_38984A0A1B0GV85 526 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 MNAT1P51948 309 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF121P58317 390 aaPredicted RBP17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 CSNK2BP67870 215 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF511Q8NB15 262 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 FAM81AQ8TBF8 368 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 RNF133Q8WVZ7 376 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 PPP1R14AQ96A00 147 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 OTULINQ96BN8 352 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 SGK3Q96BR1 496 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 TEX12Q9BXU0 123 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 NPFFR1Q9GZQ6 430 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 REEP1Q9H902 201 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 DNAJC27Q9NZQ0 273 aa17.26■□□□□ 0.35
SQSTM1-210ENST00000506042 GSTT1P30711 240 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 LGALS4P56470 323 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 KRTAP10-3P60369 221 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 HOXA4Q00056 320 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 GK3PQ14409 553 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 AANATQ16613 207 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 SLC35E4Q6ICL7 350 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 ZDHHC23Q8IYP9 409 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF454Q8N9F8 522 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 AQP11Q8NBQ7 271 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF671Q8TAW3 534 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 RNF170Q96K19 258 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 RAB3IPQ96QF0 476 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 HEXA-AS1Q9H8Q6 139 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 BRD7Q9NPI1 651 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 LYVE1Q9Y5Y7 322 aa17.25■□□□□ 0.35
SQSTM1-210ENST00000506042 H3BUI4 141 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 GYPBP06028 91 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 GLRA1P23415 457 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 GABRA2P47869 451 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 GMFBP60983 142 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 PRDX4Q13162 271 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 FBLN7Q53RD9 439 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF788Q6ZQV5 615 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 C1QL4Q86Z23 238 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 C11orf53Q8IXP5 236 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 OR4S1Q8NGB4 309 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 OR9Q2Q8NGE9 314 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 OR5T2Q8NGG2 359 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 ITPKCQ96DU7 683 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 CDRT15Q96T59 188 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 DDOQ99489 341 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 SSX3Q99909 188 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 ELAC2Q9BQ52 826 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 ABHD6Q9BV23 337 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 NLKQ9UBE8 527 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF281Q9Y2X9 895 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 RHBDD3Q9Y3P4 386 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 MAB21L2Q9Y586 359 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 TGP01266 2768 aa17.24■□□□□ 0.35
SQSTM1-210ENST00000506042 A0A1W2PRD5 423 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 A0A1W2PRF3 423 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 A0A1W2PRM7 423 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 OR2AT4A6NND4 320 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 H3BUX3 64 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 SIGLEC5O15389 551 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 XPNPEP2O43895 674 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 CST4P01036 141 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 OPN1MWP04001 364 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 LYNP07948 512 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 OPN1MW2P0DN77 364 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 OPN1MW3P0DN78 364 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 KIR2DS4P43632 304 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 CAPZA1P52907 286 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 LRRC75BQ2VPJ9 315 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 LYPD4Q6UWN0 246 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 TMEM185AQ8NFB2 350 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 PIGCQ92535 297 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 NMNAT2Q9BZQ4 307 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 MYLK2Q9H1R3 596 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 SEMA6AQ9H2E6 1030 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 MUC13Q9H3R2 512 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 CMC2Q9NRP2 79 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 SNTG1Q9NSN8 517 aa17.23■□□□□ 0.35
SQSTM1-210ENST00000506042 ZNF850A8MQ14 1090 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 H3BN98 237 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 ANGPTL7O43827 346 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 PEX14O75381 377 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 GASTP01350 101 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 ACAA1P09110 424 aaPredicted RBP17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 MAP2K3P46734 347 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 DBPQ10586 325 aaPredicted RBP17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 WDR86Q86TI4 376 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 OR5P3Q8WZ94 311 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 DUS3LQ96G46 650 aaKnown RBP17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 BTBD10Q9BSF8 475 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 MAGIXQ9H6Y5 334 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 SAMHD1Q9Y3Z3 626 aaKnown RBP17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 TRRAPQ9Y4A5 3859 aa17.22■□□□□ 0.35
SQSTM1-210ENST00000506042 VWFP04275 2813 aa17.21■□□□□ 0.35
SQSTM1-210ENST00000506042 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.21■□□□□ 0.35
SQSTM1-210ENST00000506042 SLC1A7O00341 560 aa17.21■□□□□ 0.35
SQSTM1-210ENST00000506042 GNG3P63215 75 aa17.21■□□□□ 0.35
SQSTM1-210ENST00000506042 EMX1Q04741 257 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms