RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 TPD52L2O43399 206 aaKnown RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 ZFPL1O95159 310 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 IGHV1-46P01743 117 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 ISG15P05161 165 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 RPSAP08865 295 aaKnown RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 HSMCR30P0CW71 290 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 FAHP16930 419 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 CELP19835 753 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 GNALP38405 381 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 MAGEB1P43366 347 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 TNFAIP6P98066 277 aaPredicted RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 BDH1Q02338 343 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 EMX1Q04741 257 aaPredicted RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 ACSM1Q08AH1 577 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 TNK1Q13470 666 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 OR8G1Q15617 311 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 PCGF3Q3KNV8 242 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 ZBTB37Q5TC79 503 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 DMKNQ6E0U4 476 aaPredicted RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 ZNF367Q7RTV3 350 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 SPARTQ8N0X7 666 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 PLPP7Q8NBV4 271 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 OR13C3Q8NGS6 347 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 OR10AC1Q8NH08 325 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 RPS4Y2Q8TD47 263 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 TSEN15Q8WW01 171 aaKnown RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 NEU4Q8WWR8 484 aaPredicted RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 PIGCQ92535 297 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 UFD1Q92890 307 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 DVL3Q92997 716 aaPredicted RBP8.52□□□□□ -1.05
NUP54-203ENST00000504173 SMIM19Q96E16 107 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 Q96MF0 132 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 GSX2Q9BZM3 304 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 ACOT13Q9NPJ3 140 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 DECR2Q9NUI1 292 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 RHBDD3Q9Y3P4 386 aa8.52□□□□□ -1.05
NUP54-203ENST00000504173 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.51□□□□□ -1.05
NUP54-203ENST00000504173 TRIM64A6NGJ6 449 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ANXA2P2A6NMY6 339 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 DHRS7CA6NNS2 312 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ZNF850A8MQ14 1090 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 H0YL77 283 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 MLNRO43193 412 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 NDUFS7O75251 213 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 CST4P01036 141 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 IGHV4-39P01824 125 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 HLA-DPB1P04440 258 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ADH4P08319 380 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 PAX1P15863 534 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ZNF20P17024 532 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 EFNA4P52798 201 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 CCL8P80075 99 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 KRTAP1-1Q07627 177 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 MLLT11Q13015 90 aaPredicted RBP8.51□□□□□ -1.05
NUP54-203ENST00000504173 PRDX4Q13162 271 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 DOC2BQ14184 412 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 Q6ZSR3 168 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ZDHHC23Q8IYP9 409 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 TSPAN14Q8NG11 270 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 OR51A4Q8NGJ6 313 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 OR8S1Q8NH09 359 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 GPR148Q8TDV2 347 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 GHSRQ92847 366 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 PGLYRP3Q96LB9 341 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 NR1H4Q96RI1 486 aaPredicted RBP8.51□□□□□ -1.05
NUP54-203ENST00000504173 MGLLQ99685 303 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 EGLN1Q9GZT9 426 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ZNF696Q9H7X3 374 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 SAP30LQ9HAJ7 183 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 BARX1Q9HBU1 254 aaPredicted RBP8.51□□□□□ -1.05
NUP54-203ENST00000504173 ABCB9Q9NP78 766 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 ISYNA1Q9NPH2 558 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 NKIRAS2Q9NYR9 191 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 DHDHQ9UQ10 334 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 MPC1Q9Y5U8 109 aa8.51□□□□□ -1.05
NUP54-203ENST00000504173 SVEP1Q4LDE5 3571 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 ARID1AO14497 2285 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 A0A087WXM4 84 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 A0A1B0GWJ7 208 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 A6NIN4 97 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 F5H5P2 479 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 PLPP2O43688 288 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 SSX4O60224 188 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 GMDSO60547 372 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 LMX1BO60663 402 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 NCR1O76036 304 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 LY6HO94772 140 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 NRASP01111 189 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 CD55P08174 381 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 OCM2P0CE71 109 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 PCMT1P22061 227 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 PSMB9P28065 219 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 SOX2P48431 317 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 SRP9P49458 86 aaKnown RBP8.5□□□□□ -1.05
NUP54-203ENST00000504173 MZT1Q08AG7 82 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 YIF1BQ5BJH7 314 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 CLVS2Q5SYC1 327 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 LIPKQ5VXJ0 399 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 PLCXD3Q63HM9 321 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms