RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 DYNAPQ8N1N2 210 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 TMEM185AQ8NFB2 350 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 TSPEARQ8WU66 669 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 C7orf26Q96N11 449 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 GAR1Q9NY12 217 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 KCNG2Q9UJ96 466 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 SNX13Q9Y5W8 968 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 OR2AT4A6NND4 320 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 H3BUI4 141 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 ZNF823P16415 610 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 MRPL41Q8IXM3 137 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 ZNRF1Q8ND25 227 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 Q8NFD4 153 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 OR51D1Q8NGF3 324 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 OR4C15Q8NGM1 316 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 SPSB4Q96A44 273 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 MALSU1Q96EH3 234 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 ERMAPQ96PL5 475 aaPredicted RBP12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 NMNAT3Q96T66 252 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 ASCL2Q99929 193 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 MICU1Q9BPX6 476 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 RPRD1BQ9NQG5 326 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 NLKQ9UBE8 527 aa12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 TBL2Q9Y4P3 447 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-210ENST00000503827 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 ANXA2P2A6NMY6 339 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 H0YHG0 523 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 AKR7A2O43488 359 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 RAMP3O60896 148 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 RHBDL1O75783 438 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 SLC2A1P11166 492 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 PRKXP51817 358 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 SLC25A1P53007 311 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 SSX2Q16385 188 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 AGBL2Q5U5Z8 902 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 SLC16A9Q7RTY1 509 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 ZBTB46Q86UZ6 589 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 TFAP2CQ92754 450 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 COPS4Q9BT78 406 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 PALMDQ9NP74 551 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 LSM4Q9Y4Z0 139 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 LRP12Q9Y561 859 aa12.68□□□□□ -0.38
PDLIM7-210ENST00000503827 TBX1O43435 398 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 LYL1P12980 280 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 NOS3P29474 1203 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 DYNLT3P51808 116 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 CAPZA1P52907 286 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 FXYD6P3P58550 94 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 FAM3AP98173 230 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 IL5RAQ01344 420 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 TAF13Q15543 124 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 TIGD6Q17RP2 521 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 C11orf42Q8N5U0 333 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 OR8J3Q8NGG0 315 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 RPL3LQ92901 407 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 KCNJ15Q99712 375 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 PAPOLGQ9BWT3 736 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 TMEM120AQ9BXJ8 343 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 ANKRD19PQ9H560 264 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 PPP1R3EQ9H7J1 279 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 MRPL22Q9NWU5 206 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 USE1Q9NZ43 259 aa12.67□□□□□ -0.38
PDLIM7-210ENST00000503827 TMEM210A6NLX4 147 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 ARG1P05089 322 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 GLRA1P23415 457 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 AZGP1P25311 298 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 RPS27P42677 84 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 RPL31P62899 125 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 WDR93Q6P2C0 686 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 SMARCD3Q6STE5 483 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 ZDHHC21Q8IVQ6 265 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 OR4K13Q8NH42 304 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 ZNF649Q9BS31 505 aa12.66□□□□□ -0.38
PDLIM7-210ENST00000503827 IGKV1D-17A0A075B6S4 117 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 UNC119BA6NIH7 251 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 PSG2P11465 335 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 HIST1H1CP16403 213 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 OR12D2P58182 307 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 SNCBQ16143 134 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 TMEM200BQ69YZ2 307 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 ZNF782Q6ZMW2 699 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 ETV3LQ6ZN32 361 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 CSNK2A3Q8NEV1 391 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 OR52H1Q8NGJ2 320 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 REEP6Q96HR9 211 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 FN3KQ9H479 309 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 CENPMQ9NSP4 180 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 RHBDD3Q9Y3P4 386 aa12.65□□□□□ -0.38
PDLIM7-210ENST00000503827 hCG_38984A0A1B0GV85 526 aa12.64□□□□□ -0.39
PDLIM7-210ENST00000503827 CCL3L1P16619 93 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms