RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PCOLCE2Q9UKZ9 415 aa14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF891A8MT65 544 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 ZIC2O95409 532 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 FAHP16930 419 aa14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 AVPR2P30518 371 aa14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF117Q03924 483 aa14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF705AQ6ZN79 300 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 CCL27Q9Y4X3 112 aa14.49□□□□□ -0.09
HMGXB3-202ENST00000503427 PDGFBP01127 241 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 FPR2P25090 351 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 GSG1Q2KHT4 349 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 SLC38A6Q8IZM9 456 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF687Q8N1G0 1237 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 CIB3Q96Q77 187 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 OR5V1Q9UGF6 321 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 A0A1W2PPH5 198 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 ACSM4P0C7M7 580 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 HAAOP46952 286 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 NOVA1P51513 510 aaKnown RBP14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 ENDOGQ14249 297 aaKnown RBP14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 PRRX2Q99811 253 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 PROCRQ9UNN8 238 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 IGHV3-15A0A0B4J1V0 119 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 TNFSF11O14788 317 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 CELA2BP08218 269 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 CDONQ4KMG0 1287 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF468Q5VIY5 522 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF787Q6DD87 383 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 THNSL2Q86YJ6 484 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF561Q8N587 486 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 HGDQ93099 445 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 SPSB1Q96BD6 273 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 FAM173AQ9BQD7 235 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 CHST6Q9GZX3 395 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 A0A096LPE4 126 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 A0A1W2PPZ6 126 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 DEFB109BQ30KR1 87 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 OR8D4Q8NGM9 314 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 EGLN1Q9GZT9 426 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 FBXO4Q9UKT5 387 aa14.48□□□□□ -0.09
HMGXB3-202ENST00000503427 B4GALT1P15291 398 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 GPR12P47775 334 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 MPPED2Q15777 294 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 RHBDD2Q6NTF9 364 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 ANKRD37Q7Z713 158 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 CLRN3Q8NCR9 226 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 RHOFQ9HBH0 211 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 TRPM6Q9BX84 2022 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 ALG1L2C9J202 215 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 ACOT6Q3I5F7 207 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 SLC35E1Q96K37 410 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 TERTO14746 1132 aaKnown RBP14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 CDAP32320 146 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 GSK3AP49840 483 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 CLPPQ16740 277 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 COMMD1Q8N668 190 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 C17orf47Q8NEP4 570 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 OR4F5Q8NH21 305 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 MAP6Q96JE9 813 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 OR4F4Q96R69 305 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF331Q9NQX6 463 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 UFSP2Q9NUQ7 469 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 KIF13BQ9NQT8 1826 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 TMEM272A0A1B0GTI8 110 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 K7EQM0 130 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 RAB27BO00194 218 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 THSD4Q6ZMP0 1018 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 CDC20BQ86Y33 519 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 SKA3Q8IX90 412 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 LURAP1Q96LR2 239 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 TRIB1Q96RU8 372 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF768Q9H5H4 540 aaKnown RBP14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 UCK1Q9HA47 277 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 P4HTMQ9NXG6 502 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 LAMP3Q9UQV4 416 aa14.47□□□□□ -0.09
HMGXB3-202ENST00000503427 CTAG2O75638 210 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 PTHLHP12272 177 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 HOXB3P14651 431 aaPredicted RBP14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 COX5AP20674 150 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 GLRA1P23415 457 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 GABRA4P48169 554 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 OR2B8PP59922 312 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 ZNF141Q15928 474 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 PRSS42Q7Z5A4 293 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 BOD1Q96IK1 185 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 OPA3Q9H6K4 179 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 FAM60AQ9NP50 221 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 PSENENQ9NZ42 101 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 GP1BAP07359 652 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 TMEM88Q6PEY1 159 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 LRRC3BQ96PB8 259 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 C12orf10Q9HB07 376 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 CDC42EP2O14613 210 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 PLA1AQ53H76 456 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 RXFP4Q8TDU9 374 aa14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 USB1Q9BQ65 265 aaKnown RBP14.46□□□□□ -0.09
HMGXB3-202ENST00000503427 TNFSF14O43557 240 aa14.46□□□□□ -0.1
HMGXB3-202ENST00000503427 FABP1P07148 127 aa14.46□□□□□ -0.1
HMGXB3-202ENST00000503427 MYBPHQ13203 477 aa14.46□□□□□ -0.1
HMGXB3-202ENST00000503427 HLXQ14774 488 aaPredicted RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms