RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CD8AP01732 235 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 HLA-AP01891 365 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGHV4-34P06331 123 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RETP07949 1114 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CSF3P09919 207 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CHTF8P0CG12 524 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PGA4P0DJD7 388 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PGA3P0DJD8 388 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGKV1-13P0DP09 117 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CD37P11049 281 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ERGP11308 486 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ICAM2P13598 275 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF17P17021 662 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 GABRG2P18507 467 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RCC1P18754 421 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ATF6P18850 670 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PVALBP20472 110 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 WARSP23381 471 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 MYL9P24844 172 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 BTCP35070 178 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 HRH1P35367 487 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 NUDT1P36639 197 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 STC1P52823 247 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 AP3S2P59780 193 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB8AP61006 207 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PPP1CBP62140 327 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPL10AP62906 217 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 REEP5Q00765 189 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 DR1Q01658 176 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CD164Q04900 197 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 TCP10Q12799 353 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 BNIP2Q12982 314 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 MADCAM1Q13477 382 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 AQP6Q13520 282 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB31Q13636 194 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIR2DS1Q14954 304 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRAM1Q15629 374 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRIP13Q15645 432 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 IMPG1Q17R60 797 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CHRFAM7AQ494W8 412 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 DNAL1Q4LDG9 190 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 AKIRIN2Q53H80 203 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PDZD11Q5EBL8 140 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR10J3Q5JRS4 329 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 COA6Q5JTJ3 125 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 LPCAT4Q643R3 524 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2T5Q6IEZ7 315 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM45BPQ6NSW5 357 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 NIPAL1Q6NVV3 410 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF530Q6P9A1 599 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 Q6ZT83 130 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM19A1Q7Z5A9 133 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 STX12Q86Y82 276 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB43Q86YS6 212 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 MKXQ8IYA7 352 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 LRRC34Q8IZ02 419 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PGAM4Q8N0Y7 254 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARRDC1Q8N5I2 433 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 SPICQ8N5J4 248 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 C19orf18Q8NEA5 215 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR4K17Q8NGC6 315 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2T29Q8NH02 315 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR51Q1Q8NH59 317 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR6X1Q8NH79 312 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM45AQ8TCE6 357 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 DYNC2LI1Q8TCX1 351 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZFP90Q8TF47 636 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5P2Q8WZ92 322 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM3DQ96BQ1 224 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FLYWCH2Q96CP2 140 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OTUB2Q96DC9 234 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 SEH1LQ96EE3 360 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 WDR34Q96EX3 536 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 FCRL1Q96LA6 429 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 VAT1Q99536 393 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 TEAD3Q99594 435 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 NRTNQ99748 197 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 APOL4Q9BPW4 351 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 C9orf16Q9BUW7 83 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OSBPL11Q9BXB4 747 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 COA1Q9GZY4 146 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 DEFB127Q9H1M4 99 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR51V1Q9H2C8 321 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 DHX35Q9H5Z1 703 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 UGT1A7Q9HAW7 530 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 UGT1A8Q9HAW9 530 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 RDH14Q9HBH5 336 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF629Q9UEG4 869 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF225Q9UK10 706 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC7A11Q9UPY5 501 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 WIF1Q9Y5W5 379 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 CACNG2Q9Y698 323 aa1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 PHF3Q92576 2039 aaKnown RBP1.62□□□□□ -2.15
HMGB1P35-201ENST00000503360 MEGF6O75095 1541 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIAA0232Q92628 1395 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB3GAP2Q9H2M9 1393 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRAV8-4A0A0B4J246 113 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGHV3OR16-9A0A0B4J2B5 98 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIR2DL5BA0A0G2JN68 375 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIR2DL5BA0A0G2JPC4 375 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms