RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SLC15A3Q8IY34 581 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 FAM185AQ8N0U4 392 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 CYB561A3Q8NBI2 242 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 ANGPTL6Q8NI99 470 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 RCN3Q96D15 328 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 SLAMF6Q96DU3 332 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 REEP6Q96HR9 211 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 WWC2-AS2Q96NR7 200 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 MICU1Q9BPX6 476 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
CCDC58-207ENST00000498466 TLNRD1Q9H1K6 362 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 MEGF11A6BM72 1044 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 ANXA2P2A6NMY6 339 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 SIGLEC5O15389 551 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 AKR7A2O43488 359 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 IDH3BO43837 385 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 ACAA1P09110 424 aaPredicted RBP11.29□□□□□ -0.6
CCDC58-207ENST00000498466 FAHP16930 419 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
CCDC58-207ENST00000498466 GABRA2P47869 451 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 CX3CR1P49238 355 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 LGALS4P56470 323 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 MXRA7P84157 204 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
CCDC58-207ENST00000498466 CCBE1Q6UXH8 406 aaPredicted RBP11.29□□□□□ -0.6
CCDC58-207ENST00000498466 MKXQ8IYA7 352 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 OR51L1Q8NGJ5 315 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 OR10Z1Q8NGY1 313 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 PIFOQ8TCI5 191 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 RPL3LQ92901 407 aaKnown RBP11.29□□□□□ -0.6
CCDC58-207ENST00000498466 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 RTL8AQ9BWD3 113 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 SAR1AQ9NR31 198 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 PLA2G2EQ9NZK7 142 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 RHBDD3Q9Y3P4 386 aa11.29□□□□□ -0.6
CCDC58-207ENST00000498466 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 hCG_38984A0A1B0GV85 526 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 OR2AT4A6NND4 320 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 GLCEO94923 617 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 NCK1P16333 377 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 GSK3AP49840 483 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 IL5RAQ01344 420 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 CD69Q07108 199 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC58-207ENST00000498466 PLA1AQ53H76 456 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 KCTD8Q6ZWB6 473 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 Q8N2B8 174 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 FTMTQ8N4E7 242 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 ZNRF1Q8ND25 227 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 PAPD5Q8NDF8 572 aaKnown RBP11.28□□□□□ -0.6
CCDC58-207ENST00000498466 CSNK2A3Q8NEV1 391 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 TMEM185AQ8NFB2 350 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 OR2T4Q8NH00 348 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 DDOQ99489 341 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 HEXA-AS1Q9H8Q6 139 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 COMMD3-BMI1R4GMX3 469 aa11.28□□□□□ -0.6
CCDC58-207ENST00000498466 TMEM210A6NLX4 147 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 NME4O00746 187 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 PF4V1P10720 104 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 CFL1P23528 166 aaKnown RBP11.27□□□□□ -0.61
CCDC58-207ENST00000498466 COX7A1P24310 79 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 HSD11B1P28845 292 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 MSX2P35548 267 aaPredicted RBP11.27□□□□□ -0.61
CCDC58-207ENST00000498466 SLC15A1P46059 708 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 ENTPD1P49961 510 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 CAPZA1P52907 286 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 GRB2P62993 217 aaKnown RBP11.27□□□□□ -0.61
CCDC58-207ENST00000498466 CNN3Q15417 329 aaKnown RBP11.27□□□□□ -0.61
CCDC58-207ENST00000498466 TMEM219Q86XT9 240 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
CCDC58-207ENST00000498466 C7orf34Q96L11 122 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 DHRS1Q96LJ7 313 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 FUZQ9BT04 418 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 CDCA4Q9BXL8 241 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 SP140LQ9H930 580 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 TCF19Q9Y242 345 aa11.27□□□□□ -0.61
CCDC58-207ENST00000498466 A0A1W2PPH5 198 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 WI2-2373I1.2A0A1W2PRP0 233 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF593O00488 134 aaPredicted RBP11.26□□□□□ -0.61
CCDC58-207ENST00000498466 GADD45GO95257 159 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 GLRA1P23415 457 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 FMO3P31513 532 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 RAB13P51153 203 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 SMIM11AP58511 58 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 SLC35A2P78381 396 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 SPIBQ01892 262 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 PRDX4Q13162 271 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 SNCBQ16143 134 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 KLHL12Q53G59 568 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 FAM57BQ71RH2 274 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 KCTD14Q9BQ13 255 aaPredicted RBP11.26□□□□□ -0.61
CCDC58-207ENST00000498466 OCSTAMPQ9BR26 566 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms