RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TMEM127O75204 238 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 SOD3P08294 240 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 GATA4P43694 442 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 PSMD7P51665 324 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 MRPS11P82912 194 aaKnown RBP16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 Q6ZR03 302 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 CEACAM19Q7Z692 300 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 NEU4Q8WWR8 484 aaPredicted RBP16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 OR5P3Q8WZ94 311 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 OR14A2Q96R54 314 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 MICU1Q9BPX6 476 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 PAPOLGQ9BWT3 736 aaKnown RBP16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 UBTD1Q9HAC8 227 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 NDUFA13Q9P0J0 144 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 FZR1Q9UM11 496 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 SLC7A11Q9UPY5 501 aa16.81■□□□□ 0.28
SCAMP3-209ENST00000497470 PRF1P14222 555 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 ATF1P18846 271 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 RAB3AP20336 220 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 FUT6P51993 359 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 PPP3R1P63098 170 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 GNG3P63215 75 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 PRDX4Q13162 271 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 TESK1Q15569 626 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 HSD17B12Q53GQ0 312 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 TPRA1Q86W33 373 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 NKAIN3Q8N8D7 197 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 PIGCQ92535 297 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 TMEM203Q969S6 136 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 RTL8AQ9BWD3 113 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 FUNDC2Q9BWH2 189 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 RAB1BQ9H0U4 201 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 CXXC4Q9H2H0 198 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 CXorf56Q9H5V9 222 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 DYNLRB1Q9NP97 96 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 TMEM138Q9NPI0 162 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 SNTG1Q9NSN8 517 aa16.8■□□□□ 0.28
SCAMP3-209ENST00000497470 TRIM64BA6NI03 449 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 ZSCAN5BA6NJL1 495 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 PIN1P1O15428 100 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 GABARAPO95166 117 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 ACAA1P09110 424 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 TNFRSF1AP19438 455 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 SRMP19623 302 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 CA6P23280 308 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 CFHR2P36980 270 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 SRP9P49458 86 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 TMBIM6P55061 237 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 OR8G1Q15617 311 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 UBE2V2Q15819 145 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 OR5AS1Q8N127 324 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 BHLHE23Q8NDY6 225 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 OR1M1Q8NGA1 313 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 OR13C5Q8NGS8 318 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF420Q8TAQ5 688 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 NINJ1Q92982 152 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 FOXRED1Q96CU9 486 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 EGLN1Q9GZT9 426 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 SLITRK2Q9H156 845 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 TLNRD1Q9H1K6 362 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 NOX4Q9NPH5 578 aa16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF701Q9NV72 531 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 TXNL4BQ9NX01 149 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-209ENST00000497470 ARFGEF3Q5TH69 2177 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF850A8MQ14 1090 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF701M0R085 212 aaPredicted RBP16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 MLNRO43193 412 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 AIREO43918 545 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 LILRA1O75019 489 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 IGHV1-46P01743 117 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 GADD45AP24522 165 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 CFPP27918 469 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 SOX2P48431 317 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 MTNR1BP49286 362 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF181Q2M3W8 571 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF787Q6DD87 383 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 LHFPL2Q6ZUX7 228 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 OR8S1Q8NH09 359 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 KCTD7Q96MP8 289 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 ADAT1Q9BUB4 502 aaKnown RBP16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 MSL2Q9HCI7 577 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 TCF7L1Q9HCS4 588 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 LAMP3Q9UQV4 416 aa16.78■□□□□ 0.28
SCAMP3-209ENST00000497470 PQLC2LA1A4F0 135 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 MAGEB3O15480 346 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 FSTL3O95633 263 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 ALDH3B1P43353 468 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 RBP2P50120 134 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 ASPHD2Q6ICH7 369 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 ZNF573Q86YE8 665 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 RAB2BQ8WUD1 216 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 HPSE2Q8WWQ2 592 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 TMIGD2Q96BF3 282 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 MBD6Q96DN6 1003 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 ELMOD3Q96FG2 381 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 RHOFQ9HBH0 211 aa16.77■□□□□ 0.28
SCAMP3-209ENST00000497470 DSCAMO60469 2012 aa16.76■□□□□ 0.27
SCAMP3-209ENST00000497470 IGKV1-9A0A0C4DH69 117 aa16.76■□□□□ 0.27
SCAMP3-209ENST00000497470 SMIM31A0A1B0GVY4 71 aa16.76■□□□□ 0.27
SCAMP3-209ENST00000497470 LRP5LA4QPB2 252 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms