RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ITGA3P26006 1051 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 TMEM50BP56557 158 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 HGFACQ04756 655 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 GK2Q14410 553 aaPredicted RBP11.4□□□□□ -0.58
GARNL3-220ENST00000496711 DCAF10Q5QP82 559 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 CLVS2Q5SYC1 327 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 LPCAT3Q6P1A2 487 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 LYG2Q86SG7 212 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 OR51T1Q8NGJ9 327 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 OR5M8Q8NGP6 311 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 ABHD3Q8WU67 409 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 PIGTQ969N2 578 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 REEP6Q96HR9 211 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 ARHGAP5-AS1Q96IT6 56 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 CITED4Q96RK1 184 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 S100A13Q99584 98 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 GPR35Q9HC97 309 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.4□□□□□ -0.58
GARNL3-220ENST00000496711 NOP16Q9Y3C1 178 aaKnown RBP11.4□□□□□ -0.58
GARNL3-220ENST00000496711 MAB21L2Q9Y586 359 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 MUC3AQ02505 3323 aa11.4□□□□□ -0.58
GARNL3-220ENST00000496711 FXYD6-FXYD2A0A087WZ82 144 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 LINC00862A6NCI5 91 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 RAD51DO75771 328 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 PMP2P02689 132 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 LIPCP11150 499 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 SERPINA2P20848 420 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 CBX5P45973 191 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 HTR5AP47898 357 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 GMFBP60983 142 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 PCBD1P61457 104 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 LY6G6FQ5SQ64 297 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 FAHD2BQ6P2I3 314 aaPredicted RBP11.4□□□□□ -0.59
GARNL3-220ENST00000496711 SLC16A14Q7RTX9 510 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 C1QL2Q7Z5L3 287 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 OR2AE1Q8NHA4 323 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 FAHD2AQ96GK7 314 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 CDC6Q99741 560 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 FAM117AQ9C073 453 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 FXYD6Q9H0Q3 95 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 R4GN57 208 aa11.4□□□□□ -0.59
GARNL3-220ENST00000496711 NCOR1O75376 2440 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 OR2AT4A6NND4 320 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 FOXI3A8MTJ6 420 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-220ENST00000496711 CFDP00746 253 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-220ENST00000496711 IL2RAP01589 272 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 ZBTB25P24278 435 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 PSG4Q00888 419 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 PPP1R1AQ13522 171 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 ARFRP1Q13795 201 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 OR1C1Q15619 314 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 MICBQ29980 383 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 CLLU1Q5K131 121 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 VAX1Q5SQQ9 334 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 HES3Q5TGS1 186 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 DHRS13Q6UX07 377 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.39□□□□□ -0.59
GARNL3-220ENST00000496711 ARRDC1Q8N5I2 433 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 AKR7LQ8NHP1 331 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 SPSB1Q96BD6 273 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 CPNE2Q96FN4 548 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-220ENST00000496711 OCSTAMPQ9BR26 566 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 TM2D1Q9BX74 207 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 OR2H1Q9GZK4 316 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 GPR173Q9NS66 373 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 KCNN3Q9UGI6 736 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 TIMM10BQ9Y5J6 103 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 GPR179Q6PRD1 2367 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 RTTNQ86VV8 2226 aa11.39□□□□□ -0.59
GARNL3-220ENST00000496711 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 IGKV3D-15A0A087WSY6 115 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 RPS10-NUDT3A0A1W2PQS6 291 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 LCATP04180 440 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF24P17028 368 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 CPT2P23786 658 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 ACKR3P25106 362 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 AVPR2P30518 371 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 S100A11P31949 105 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 RFC3P40938 356 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 OR3A3P47888 321 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 LHX2P50458 406 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 TAS2R31P59538 309 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 SORDQ00796 357 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 AIMP2Q13155 320 aaKnown RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 CNN3Q15417 329 aaKnown RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 HOGA1Q86XE5 327 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 OR10K1Q8NGX5 313 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 HES7Q9BYE0 225 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 TMEM9BQ9NQ34 198 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 ZNF391Q9UJN7 358 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 NOSIPQ9Y314 301 aaKnown RBP11.38□□□□□ -0.59
GARNL3-220ENST00000496711 AUP1Q9Y679 476 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 C9orf170A2RU37 121 aa11.38□□□□□ -0.59
GARNL3-220ENST00000496711 RFPL4AA6NLU0 287 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms