RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TDGF1P3P51864 188 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 PTTG1IPP53801 180 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 PNLIPRP2P54317 469 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 WNT4P56705 351 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 FABP5Q01469 135 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 MC2RQ01718 297 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 RAB40BQ12829 278 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 HNRNPA0Q13151 305 aaKnown RBP5.46□□□□□ -1.54
SSBP1-213ENST00000496622 MELKQ14680 651 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 PCOLCEQ15113 449 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 C5orf64Q2M2E5 130 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 TP53I3Q53FA7 332 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 ALG10Q5BKT4 473 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 LEG1Q6P5S2 330 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 C3P1Q6ZMU1 363 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 MEPCEQ7L2J0 689 aaKnown RBP5.46□□□□□ -1.54
SSBP1-213ENST00000496622 WFDC3Q8IUB2 231 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 CBLN2Q8IUK8 224 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 LINC00346Q8IVM7 164 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 MS4A15Q8N5U1 240 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 NPEPL1Q8NDH3 523 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 OR2D3Q8NGH3 330 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 OR5W2Q8NH69 310 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 ABHD3Q8WU67 409 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 EMC6Q9BV81 110 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 BARHL1Q9BZE3 327 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 NUAK2Q9H093 628 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 SYT4Q9H2B2 425 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 TCF7L1Q9HCS4 588 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 SLC7A11Q9UPY5 501 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 MED13Q9UHV7 2174 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 IGHV1-45A0A0A0MS14 117 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1B0GTH9 108 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ANKRD61A6NGH8 418 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TUBAL3A6NHL2 446 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 A6NIZ1 184 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 AIPO00170 330 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 KDM4BO94953 1096 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 CFDP00746 253 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ARG1P05089 322 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 IFI6P09912 130 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TSPAN19P0C672 248 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 OR8U8P0C7N1 319 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ASAH2BP0C7U1 165 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 COX6A1P12074 109 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 HLA-GP17693 338 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SHC1P29353 583 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SLC6A6P31641 620 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SDC2P34741 201 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SFTPDP35247 375 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 PSMB10P40306 273 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 CRYBA4P53673 196 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TLE4Q04727 773 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.45□□□□□ -1.542e-6■□□□□ 8.3
SSBP1-213ENST00000496622 Q0VFX4 171 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ISXQ2M1V0 245 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ODF4Q2M2E3 257 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SLC25A30Q5SVS4 291 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ATP1A1-AS1Q5TC04 95 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 RGS7BPQ6MZT1 257 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM205Q6UW68 189 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 KCTD9Q7L273 389 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 FAM214BQ7L5A3 538 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF367Q7RTV3 350 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 NAXDQ8IW45 347 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 OR6V1Q8N148 313 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF485Q8NCK3 441 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 BEND2Q8NDZ0 799 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 FCGR1BQ92637 280 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 C4orf36Q96KX1 117 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 RSRP1Q9BUV0 290 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ALG8Q9BVK2 526 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ASPNQ9BXN1 380 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MMP28Q9H239 520 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 CDCP1Q9H5V8 836 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 PTGES2Q9H7Z7 377 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ADGRL4Q9HBW9 690 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ISYNA1Q9NPH2 558 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MED9Q9NWA0 146 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TAS2R5Q9NYW4 299 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MRTO4Q9UKD2 239 aaKnown RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MAB21L2Q9Y586 359 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 COL12A1Q99715 3063 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TMED7-TICAM2A0A0A6YYA0 188 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SPAARA0A1B0GVQ0 90 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 DAPL1A0PJW8 107 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 KIAA1324LA8MWY0 1029 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 RAMP1O60894 148 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SLC25A12O75746 678 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ZFAND5O76080 213 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MPZL1O95297 269 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MPC2O95563 127 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 METTL15P1P0C7V9 234 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 CCL3P10147 92 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 PSMA1P25786 263 aaKnown RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 RFX2P48378 723 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 P2RX1P51575 399 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 FOXF1Q12946 379 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 C1DQ13901 141 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms