RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 DAPP51397 102 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 CRISP1P54107 249 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 IL5RAQ01344 420 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 MICBQ29980 383 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 STUMQ69YW2 141 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 PNLDC1Q8NA58 520 aaKnown RBP11.79□□□□□ -0.52
VTI1A-209ENST00000496445 SGMS2Q8NHU3 365 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 OR5P3Q8WZ94 311 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 RPL3LQ92901 407 aaKnown RBP11.79□□□□□ -0.52
VTI1A-209ENST00000496445 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 PKP2Q99959 881 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 MICU1Q9BPX6 476 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 WDR13Q9H1Z4 485 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 FAM206AQ9NX38 181 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 TVP23BQ9NYZ1 205 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 KIF17Q9P2E2 1029 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 RPUSD1Q9UJJ7 312 aaKnown RBP11.79□□□□□ -0.52
VTI1A-209ENST00000496445 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 COPS3Q9UNS2 423 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 MPC1Q9Y5U8 109 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 VWFP04275 2813 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 TMEM210A6NLX4 147 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 ANXA2P2A6NMY6 339 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 M0R129 80 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 PSMD9O00233 223 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 GSC2O15499 205 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 PRKYO43930 277 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 TFF1P04155 84 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 SELLP14151 372 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 DCTDP32321 178 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 BPIFB3P59826 476 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 ARF6P62330 175 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 SNCBQ16143 134 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 SNAPC1Q16533 368 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 FAM76BQ5HYJ3 339 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 Q6YL49 198 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 FTMTQ8N4E7 242 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 SCCPDHQ8NBX0 429 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 LY6G5BQ8NDX9 201 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 DNAJC9Q8WXX5 260 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 C12orf43Q96C57 262 aaKnown RBP11.78□□□□□ -0.52
VTI1A-209ENST00000496445 TEAD3Q99594 435 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 RTL8AQ9BWD3 113 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 TTTY10Q9BZA0 68 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 YIPF3Q9GZM5 350 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
VTI1A-209ENST00000496445 ZNF391Q9UJN7 358 aa11.78□□□□□ -0.52
VTI1A-209ENST00000496445 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 MITFO75030 526 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 IGLV3-1P01715 115 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 MELTFP08582 738 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 GMFBP60983 142 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 IL13RA1P78552 427 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 MFGE8Q08431 387 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 IKZF1Q13422 519 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 PTGES3Q15185 160 aaKnown RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 LCN1P1Q5VSP4 162 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 BCDIN3DQ7Z5W3 292 aaKnown RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 KRT77Q7Z794 578 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 ZDHHC23Q8IYP9 409 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 OR10Z1Q8NGY1 313 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 PIGCQ92535 297 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 LHX4Q969G2 390 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 RNF166Q96A37 237 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 RAB3IPQ96QF0 476 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-209ENST00000496445 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 ABCB9Q9NP78 766 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 NOX4Q9NPH5 578 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 SNTG1Q9NSN8 517 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 HAO2Q9NYQ3 351 aa11.77□□□□□ -0.53
VTI1A-209ENST00000496445 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 A0A0U1RQV5 110 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 ZNF816-ZNF321PA0A0X1KG74 233 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 AKR7A2O43488 359 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 RHBDL1O75783 438 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
VTI1A-209ENST00000496445 OMGP23515 440 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 EPHA2P29317 976 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 TGM4P49221 684 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 GPM6AP51674 278 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 ROM1Q03395 351 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 BNIP1Q12981 228 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 PDCD1Q15116 288 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 ATP6AP1Q15904 470 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
VTI1A-209ENST00000496445 DEGS2Q6QHC5 323 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 SHISA2Q6UWI4 295 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 KCTD8Q6ZWB6 473 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 VMO1Q7Z5L0 202 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 PDZD9Q8IXQ8 264 aa11.76□□□□□ -0.53
VTI1A-209ENST00000496445 OR5T2Q8NGG2 359 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms