RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 HAO2Q9NYQ3 351 aa7.9□□□□□ -1.14
UBR4-216ENST00000494503 FOXJ3Q9UPW0 622 aa7.9□□□□□ -1.14
UBR4-216ENST00000494503 RHBDD3Q9Y3P4 386 aa7.9□□□□□ -1.14
UBR4-216ENST00000494503 ZNF850A8MQ14 1090 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 ARPC2O15144 300 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 GPR37O15354 613 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 PEX14O75381 377 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 TSPAN9O75954 239 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 CCNB2O95067 398 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 APOC1P02654 83 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 H2BFMP0C1H6 154 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 H2AFXP16104 143 aaPredicted RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 ZNF3P17036 446 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 SPI1P17947 270 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 CFL1P23528 166 aaKnown RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 PAX6P26367 422 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 OTX1P32242 354 aaPredicted RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 GSK3AP49840 483 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 PPP1R8Q12972 351 aaKnown RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 PRDX4Q13162 271 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 SNCBQ16143 134 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 C11orf91Q3C1V1 193 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 NSUN5P1Q3KNT7 163 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 PLA1AQ53H76 456 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 STUMQ69YW2 141 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 C11orf53Q8IXP5 236 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 LINC00471Q8N535 108 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 KLHDC1Q8N7A1 406 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 AQP11Q8NBQ7 271 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 CSNK2A3Q8NEV1 391 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 RORBQ92753 470 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 SGK3Q96BR1 496 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 C12orf43Q96C57 262 aaKnown RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 DUS3LQ96G46 650 aaKnown RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 MED30Q96HR3 178 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 RNF170Q96K19 258 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 INTS14Q96SY0 518 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 SSX3Q99909 188 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 ELAC2Q9BQ52 826 aaKnown RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 FAM234AQ9H0X4 552 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 METTL8Q9H825 291 aaKnown RBP7.89□□□□□ -1.15
UBR4-216ENST00000494503 GORASP2Q9H8Y8 452 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 MED20Q9H944 212 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 ARMC1Q9NVT9 282 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 LYVE1Q9Y5Y7 322 aa7.89□□□□□ -1.15
UBR4-216ENST00000494503 hCG_38984A0A1B0GV85 526 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 FAM183AA6NL82 134 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.88□□□□□ -1.15
UBR4-216ENST00000494503 GLRA1P23415 457 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 COX7A1P24310 79 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 GPM6AP51674 278 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 UBE2E1P51965 193 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 DGUOKQ16854 277 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 ZBTB37Q5TC79 503 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 METAP1DQ6UB28 335 aaPredicted RBP7.88□□□□□ -1.15
UBR4-216ENST00000494503 CYP2R1Q6VVX0 501 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 Q8N7P7 452 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 PAPD5Q8NDF8 572 aaKnown RBP7.88□□□□□ -1.15
UBR4-216ENST00000494503 LY6G5BQ8NDX9 201 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 OR2T33Q8NG76 320 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 OR52H1Q8NGJ2 320 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 OR8D4Q8NGM9 314 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 MRAPQ8TCY5 172 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 THEM6Q8WUY1 208 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 SGCDQ92629 289 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 ITPKCQ96DU7 683 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 GAFA1Q96PS6 74 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 BTBD10Q9BSF8 475 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 ABHD6Q9BV23 337 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 OR51V1Q9H2C8 321 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 IL1RAPQ9NPH3 570 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 TAS2R1Q9NYW7 299 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 NLKQ9UBE8 527 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 SF3B6Q9Y3B4 125 aaKnown RBP7.88□□□□□ -1.15
UBR4-216ENST00000494503 U3KQV3 271 aa7.88□□□□□ -1.15
UBR4-216ENST00000494503 TMEM210A6NLX4 147 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 OR2AT4A6NND4 320 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 H3BN98 237 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 M0R1W7 72 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 KRT36O76013 467 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 GASTP01350 101 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 OPN1MWP04001 364 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 SEMG1P04279 462 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 OPN1MW2P0DN77 364 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 OPN1MW3P0DN78 364 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 PAICSP22234 425 aaKnown RBP7.87□□□□□ -1.15
UBR4-216ENST00000494503 GSTT1P30711 240 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 BLVRAP53004 296 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 LGALS4P56470 323 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 ACSM1Q08AH1 577 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 LRRC75BQ2VPJ9 315 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 DMRTC1Q5HYR2 192 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 CEP78Q5JTW2 689 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 RASSF6Q6ZTQ3 369 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 ZDHHC23Q8IYP9 409 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 ZNRF1Q8ND25 227 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 BEND2Q8NDZ0 799 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 OR5D13Q8NGL4 314 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 OR4Q3Q8NH05 313 aa7.87□□□□□ -1.15
UBR4-216ENST00000494503 PPP1R35Q8TAP8 253 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms