RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 GOSR1O95249 250 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 IGHMP01871 453 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 STATHP02808 62 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 S100A8P05109 93 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 HEXBP07686 556 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 CYC1P08574 325 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 PET100P0DJ07 73 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 FOLR2P14207 255 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 IGFBP3P17936 291 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ACHEP22303 614 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 RFC3P40938 356 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 EMDP50402 254 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 PRKXP51817 358 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 HCCSP53701 268 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TOMM34Q15785 309 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 NKPD1Q17RQ9 610 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 Q5PR19 223 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ELP2Q6IA86 826 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 SLC18B1Q6NT16 456 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 C16orf47Q6ZP98 133 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 OR2W3Q7Z3T1 314 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF584Q8IVC4 421 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF679Q8IYX0 411 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 OR6S1Q8NH40 331 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 C16orf52Q8NHV5 167 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ZCCHC10Q8TBK6 192 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TSEN15Q8WW01 171 aaKnown RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 PCNPQ8WW12 178 aaKnown RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ANKRD9Q96BM1 317 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ZBTB8AQ96BR9 441 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 PTCHD1Q96NR3 888 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 SCGB3A2Q96PL1 93 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TSNAXQ99598 290 aaKnown RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 VRK1Q99986 396 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 MACROD1Q9BQ69 325 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TCEAL7Q9BRU2 100 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 SEC11CQ9BY50 192 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 MMP25Q9NPA2 562 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 MMP26Q9NRE1 261 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 IKZF2Q9UKS7 526 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ADAM18Q9Y3Q7 739 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TGP01266 2768 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ABCA1O95477 2261 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 TRAV8-7A0A075B6U6 113 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 TVP23AA6NH52 213 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 NPIPB13A6NJU9 1138 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 CEACAM18A8MTB9 384 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 NPIPB4C9JG80 1138 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 H0YC42 278 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 TAAR5O14804 337 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 LDLRAD4O15165 306 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DUS4LO95620 317 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 CD3DP04234 171 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 LYL1P12980 280 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 RNH1P13489 461 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 S1PR1P21453 382 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ZBTB25P24278 435 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 HTR2CP28335 458 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 CDKN2AP42771 156 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 PPICP45877 212 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 SLC6A9P48067 706 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 RAB13P51153 203 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 CLDN12P56749 244 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 CTXN1P60606 82 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ERVK-25P63136 954 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DEFA5Q01523 94 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DHRS2Q13268 280 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 SLC17A1Q14916 467 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 C2orf76Q3KRA6 126 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 KLHL26Q53HC5 615 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 RNASE10Q5GAN6 216 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ATPAF1Q5TC12 328 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF468Q5VIY5 522 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 FNDC7Q5VTL7 733 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DCAF12L2Q5VW00 463 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 HAGHLQ6PII5 290 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 PAPD4Q6PIY7 484 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF704Q6ZNC4 412 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 BPIFCQ8NFQ6 507 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DMBX1Q8NFW5 382 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 LILRB1Q8NHL6 650 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DUSP19Q8WTR2 217 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 GCDHQ92947 438 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 RASD2Q96D21 266 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 SEH1LQ96EE3 360 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 UBQLN4Q9NRR5 601 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ZFP57Q9NU63 452 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 FBXO34Q9NWN3 711 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF629Q9UEG4 869 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 DHDHQ9UQ10 334 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 PKD1L1Q8TDX9 2849 aa9.32□□□□□ -0.92
PDLIM1-205ENST00000493949 NCKAP5O14513 1909 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 IGKV1D-42A0A075B6H8 117 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 NPIPA5A0A0B4J1W7 369 aa9.31□□□□□ -0.92
PDLIM1-205ENST00000493949 A0A0G2JNJ9 132 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms