RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CEACAM3P40198 252 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 RANBP1P43487 201 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 RGS19P49795 217 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 NCBP2P52298 156 aaKnown RBP eCLIP3.21□□□□□ -1.9
GTF3A-208ENST00000493903 PPP1CBP62140 327 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 SKP1P63208 163 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 C2orf54Q08AI8 447 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 GUCA2BQ16661 112 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 TTLL9Q3SXZ7 439 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 STRADAQ7RTN6 431 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 CYP4Z1Q86W10 505 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 SPAG16Q8N0X2 631 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 OR2Y1Q8NGV0 311 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 IL22RA2Q969J5 263 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 MARC2Q969Z3 335 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 LRRC58Q96CX6 371 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 RNF185Q96GF1 192 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 UQCC2Q9BRT2 126 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 CLMPQ9H6B4 373 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 FAM49BQ9NUQ9 324 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 SDHAF2Q9NX18 166 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 RHBDL2Q9NX52 303 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 CLEC4EQ9ULY5 219 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 TSSC4Q9Y5U2 329 aaPredicted RBP3.21□□□□□ -1.9
GTF3A-208ENST00000493903 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
GTF3A-208ENST00000493903 URGCP-MRPS24S4R325 110 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 ANKRD31Q8N7Z5 1873 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 MRC1P22897 1456 aa3.21□□□□□ -1.9
GTF3A-208ENST00000493903 AFDNP55196 1824 aaKnown RBP3.21□□□□□ -1.9
GTF3A-208ENST00000493903 FER1L6Q2WGJ9 1857 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 FAM168BA1KXE4 195 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 TVP23AA6NH52 213 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 GOLGA8JA6NMD2 632 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 H7C1H1 209 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 K7EN84 100 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 hCG_2039718K7EN88 272 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 ZNF593O00488 134 aaPredicted RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 KMOO15229 486 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 B4GALT5O43286 388 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 SUPT7LO94864 414 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 TTC4O95801 387 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 OR5AL1P0C617 328 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 GOLGA8HP0CJ92 632 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 CD37P11049 281 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 CRISP2P16562 243 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 TCP1P17987 556 aaKnown RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 RAB3AP20336 220 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 HTR1EP28566 365 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 VEGFCP49767 419 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 UBE2E1P51965 193 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 MLF1P58340 268 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 HERVK_113P61574 105 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 UBE2IP63279 158 aaKnown RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 IFFO1Q0D2I5 559 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 DYNC1I2Q13409 638 aaKnown RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 MAPRE2Q15555 327 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 ZBTB6Q15916 424 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 ACTL10Q5JWF8 245 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 GFI1BQ5VTD9 330 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 RAB43Q86YS6 212 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 DOK4Q8TEW6 326 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 RGP1Q92546 391 aaPredicted RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 TNFRSF14Q92956 283 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 C16orf74Q96GX8 76 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 UBE2E2Q96LR5 201 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 TEAD3Q99594 435 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 CTRCQ99895 268 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 GFRA4Q9GZZ7 299 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 WDR55Q9H6Y2 383 aaPredicted RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 PLEKHA1Q9HB21 404 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 MED4Q9NPJ6 270 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 PCYOX1Q9UHG3 505 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 TRMT112Q9UI30 125 aaKnown RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 ZNF257Q9Y2Q1 563 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 KLF12Q9Y4X4 402 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 DICER1Q9UPY3 1922 aaKnown RBP3.2□□□□□ -1.9
GTF3A-208ENST00000493903 SCN7AQ01118 1682 aa3.2□□□□□ -1.9
GTF3A-208ENST00000493903 IGHV2OR16-5A0A0B4J2B6 119 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 KLF18A0A0U1RQI7 1052 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 H7C417 338 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 GOLGA8RI6L899 631 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 TOR1AO14656 332 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 ITGB1BP1O14713 200 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 CTNSO60931 367 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 UPK1BO75841 260 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 BRI3O95415 125 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 PTHP01270 115 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 S100A6P06703 90 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 SLC35E2BP0CK96 405 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 MYCNOSP40205 109 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 RGS6P49758 472 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 ZNF138P52744 262 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 SLC7A9P82251 487 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 REG3AQ06141 175 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 SMARCB1Q12824 385 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 FAM27D1Q5T7N8 215 aa3.19□□□□□ -1.9
GTF3A-208ENST00000493903 OR2T5Q6IEZ7 315 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms