RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 DDIT4LQ96D03 193 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 ELMOD3Q96FG2 381 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 SLC35G5Q96KT7 338 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 CMTM3Q96MX0 182 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 TSSK6Q9BXA6 273 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 OR51I1Q9H343 314 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 EVA1AQ9H8M9 152 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 NDUFAF4Q9P032 175 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 EXTL2Q9UBQ6 330 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 PCDHB10Q9UN67 800 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 WDR45Q9Y484 360 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 DSPPQ9NZW4 1301 aa11.27□□□□□ -0.61
HDAC3-213ENST00000492506 A0A096LPE4 126 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 A0A1W2PPZ6 126 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ZNF503-AS2A6NEH8 195 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 AQP7P3A6NL99 342 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 MCRIP1C9JLW8 97 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 WNT9BO14905 357 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 UPK3AO75631 287 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ATG12O94817 140 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 SERPINA3P01011 423 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 AVPP01185 164 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 RLN2P04090 185 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 IL5P05113 134 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ERCC1P07992 297 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 MSMBP08118 114 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ADRA2AP08913 450 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 OR12D1P0DN82 309 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 PRPS1L1P21108 318 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 MNDAP41218 407 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 LIMS1P48059 325 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 UBE2NP61088 152 aaKnown RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 POU3F1Q03052 451 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 MSMPQ1L6U9 139 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 AWAT1Q58HT5 328 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 LIPKQ5VXJ0 399 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ABHD12BQ7Z5M8 362 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 KRT77Q7Z794 578 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 OAFQ86UD1 273 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 LHFPL3Q86UP9 236 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 RNASE11Q8TAA1 199 aaKnown RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 RAB8BQ92930 207 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 PHYHIPLQ96FC7 376 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ALKBH3Q96Q83 286 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 TCF7L1Q9HCS4 588 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 ZFP57Q9NU63 452 aa11.26□□□□□ -0.61
HDAC3-213ENST00000492506 SF3B6Q9Y3B4 125 aaKnown RBP11.26□□□□□ -0.61
HDAC3-213ENST00000492506 IGHV2OR16-5A0A0B4J2B6 119 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 TMEM229AB2RXF0 380 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 ZNF587BE7ETH6 402 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 FAAHO00519 579 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 CBR1P16152 277 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 MMP15P51511 669 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 DEFA5Q01523 94 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 HLXQ14774 488 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-213ENST00000492506 DNLZQ5SXM8 178 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 ANXA8L1Q5VT79 327 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 GSG1LQ6UXU4 331 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 FAM122BQ7Z309 247 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 VTCN1Q7Z7D3 282 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 PTOV1Q86YD1 416 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 OR1S1Q8NH92 325 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 XAGE5Q8WWM1 108 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 CXorf58Q96LI9 332 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 ANKRD19PQ9H560 264 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 LPAR2Q9HBW0 351 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 DYNLRB1Q9NP97 96 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-213ENST00000492506 ASH2LQ9UBL3 628 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 RPS6KB2Q9UBS0 482 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 BTNL2Q9UIR0 455 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 FBXL3Q9UKT7 428 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
HDAC3-213ENST00000492506 ARHGAP32A7KAX9 2087 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 UBE2CO00762 179 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 KRT33AO76009 404 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 OR2A4O95047 310 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 UBL3O95164 117 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 AGR2O95994 175 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 C1QCP02747 245 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 TFP02787 698 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 HPXP02790 462 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 EPHA1P21709 976 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 COL8A2P25067 703 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 BTCP35070 178 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 CD81P60033 236 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 SEC61A1P61619 476 aaKnown RBP11.24□□□□□ -0.61
HDAC3-213ENST00000492506 LMO4P61968 165 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 P2RY14Q15391 338 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 OR7A5Q15622 319 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 MPPED2Q15777 294 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 TNFAIP8L2Q6P589 184 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-213ENST00000492506 COQ8AQ8NI60 647 aa11.24□□□□□ -0.61
HDAC3-213ENST00000492506 C15orf40Q8WUR7 153 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms