RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 IL13RA1P78552 427 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 PRDX4Q13162 271 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 PDCD1Q15116 288 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 C11orf91Q3C1V1 193 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 WDR38Q5JTN6 314 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 LCN1P1Q5VSP4 162 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 FAHD1Q6P587 224 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 KCTD18Q6PI47 426 aaPredicted RBP6.84□□□□□ -1.31
LSM2-213ENST00000491421 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 KCTD8Q6ZWB6 473 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 BTN2A1Q7KYR7 527 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 SLC36A1Q7Z2H8 476 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 COMMD2Q86X83 199 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 FAM216BQ8N7L0 139 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 FAM81AQ8TBF8 368 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 GATAD2BQ8WXI9 593 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 OR5P3Q8WZ94 311 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 PIGCQ92535 297 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 C12orf43Q96C57 262 aaKnown RBP6.84□□□□□ -1.31
LSM2-213ENST00000491421 NRBF2Q96F24 287 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 LYZL4Q96KX0 146 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 TBX15Q96SF7 602 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 CCL13Q99616 98 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 PKP2Q99959 881 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 ZNF747Q9BV97 191 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 PRRG3Q9BZD7 231 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 YIPF3Q9GZM5 350 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 SIRPDQ9H106 197 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 TLNRD1Q9H1K6 362 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 NOX4Q9NPH5 578 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 TNFRSF19Q9NS68 423 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 DNAJB11Q9UBS4 358 aa6.84□□□□□ -1.31
LSM2-213ENST00000491421 IGHV1-69DA0A0B4J2H0 117 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 CENPVL3A0A0U1RRI6 287 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 TMEM269A0A1B0GVZ9 245 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 A0A1B0GW55 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 CCDC182A6NF36 153 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 NKX6-3A6NJ46 265 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 SRRM5B3KS81 715 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 PSMD9O00233 223 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 NDUFB3O43676 98 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 FCN3O75636 299 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 SCGB1D2O95969 90 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 IGHV1-69P01742 117 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L2P0CJ85 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L3P0CJ86 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L4P0CJ87 422 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L5P0CJ88 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L6P0CJ89 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L7P0CJ90 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 ARF6P62330 175 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 IKZF1Q13422 519 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 PTGES3Q15185 160 aaKnown RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 STUMQ69YW2 141 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 C16orf87Q6PH81 154 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DEGS2Q6QHC5 323 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4L9Q6RFH8 374 aaPredicted RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 Q6YL49 198 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 ZDHHC23Q8IYP9 409 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 FGFRL1Q8N441 504 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 SCCPDHQ8NBX0 429 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 OR5T2Q8NGG2 359 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 OR10Z1Q8NGY1 313 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 HPSE2Q8WWQ2 592 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 ASB17Q8WXJ9 295 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 TAF15Q92804 592 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM2-213ENST00000491421 RPL3LQ92901 407 aaKnown RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 LHX4Q969G2 390 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 SEH1LQ96EE3 360 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 RNF170Q96K19 258 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 HIST1H2AAQ96QV6 131 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 TEAD3Q99594 435 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 CADM1Q9BY67 442 aaKnown RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 MROQ9BYG7 248 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 PRDM13Q9H4Q3 707 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 CNTD2Q9H8S5 307 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 UNKLQ9H9P5 680 aaKnown RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 FAM206AQ9NX38 181 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 HAO2Q9NYQ3 351 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 ONECUT1Q9UBC0 465 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 DUX4Q9UBX2 424 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 RPUSD1Q9UJJ7 312 aaKnown RBP6.83□□□□□ -1.32
LSM2-213ENST00000491421 TMEM14AQ9Y6G1 99 aa6.83□□□□□ -1.32
LSM2-213ENST00000491421 MGAM2Q2M2H8 2515 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 A0A0U1RQV5 110 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 ZNF816-ZNF321PA0A0X1KG74 233 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 A0A1B0GVI7 797 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 ACOD1A6NK06 481 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 M0R129 80 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 GSC2O15499 205 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 AKR7A2O43488 359 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 PRKYO43930 277 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 ZNF254O75437 659 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 CRYBA1P05813 215 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 MELTFP08582 738 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 MAP2K3P46734 347 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 DAPP51397 102 aa6.82□□□□□ -1.32
LSM2-213ENST00000491421 GPM6AP51674 278 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms