RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 OR13C9Q8NGT0 318 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 OR10AC1Q8NH08 325 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 RAB2BQ8WUD1 216 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 RGP1Q92546 391 aaPredicted RBP9.36□□□□□ -0.91
VARS2-210ENST00000490699 YIPF6Q96EC8 236 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 ADAT3Q96EY9 351 aaPredicted RBP9.36□□□□□ -0.91
VARS2-210ENST00000490699 ELMOD3Q96FG2 381 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 BORCS8Q96FH0 119 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 GPER1Q99527 375 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 CCL19Q99731 98 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 VRK1Q99986 396 aaPredicted RBP9.36□□□□□ -0.91
VARS2-210ENST00000490699 BCL7BQ9BQE9 202 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 SLC30A2Q9BRI3 323 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 CXXC4Q9H2H0 198 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 MSL2Q9HCI7 577 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 NOX4Q9NPH5 578 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 TMEM138Q9NPI0 162 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 GPR173Q9NS66 373 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 SNTG1Q9NSN8 517 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 TAS2R4Q9NYW5 299 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 FOXJ3Q9UPW0 622 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 LAMP3Q9UQV4 416 aa9.36□□□□□ -0.91
VARS2-210ENST00000490699 LRRK2Q5S007 2527 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 TRBV5-7A0A0A0MS05 114 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 SMIM31A0A1B0GVY4 71 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 A0A1W2PPK0 400 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 A6NIN4 97 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 TMEM210A6NLX4 147 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 SPRY3O43610 288 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 UCHL1P09936 223 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 ATF1P18846 271 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 BDKRB2P30411 391 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 RBP2P50120 134 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 ATP1B3P54709 279 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 TMBIM6P55061 237 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 RPS11P62280 158 aaKnown RBP eCLIP9.35□□□□□ -0.91
VARS2-210ENST00000490699 GNG3P63215 75 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 TNFAIP6P98066 277 aaPredicted RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 TESK1Q15569 626 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 CEACAM21Q3KPI0 293 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 CEP78Q5JTW2 689 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 PRR14LQ5THK1 2151 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 GLT8D1Q68CQ7 371 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 CD200R1LQ6Q8B3 271 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 DTX2Q86UW9 622 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 ZNF573Q86YE8 665 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 ANKRD13BQ86YJ7 626 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 OR5A2Q8NGI9 324 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 LILRB1Q8NHL6 650 aaPredicted RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 ZNF420Q8TAQ5 688 aaPredicted RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 FOXRED1Q96CU9 486 aaPredicted RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 TRMT61AQ96FX7 289 aaKnown RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 RNF170Q96K19 258 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 S100A13Q99584 98 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 OR51E2Q9H255 320 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 BATF3Q9NR55 127 aa9.35□□□□□ -0.91
VARS2-210ENST00000490699 TXNL4BQ9NX01 149 aaKnown RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 SF3B6Q9Y3B4 125 aaKnown RBP9.35□□□□□ -0.91
VARS2-210ENST00000490699 TRAV1-2A0A0B4J238 106 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 FAM230AA0A1W2PPH8 454 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 A6NLC8 198 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 C17orf100A8MU93 164 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 SLC22A1O15245 554 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 SC5DO75845 299 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 ALX3O95076 343 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 NAT2P11245 290 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 IRF2P14316 349 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 SRMP19623 302 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 ANOS1P23352 680 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 AZGP1P25311 298 aaKnown RBP9.34□□□□□ -0.91
VARS2-210ENST00000490699 CRYBB2P43320 205 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 MMP15P51511 669 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 MTCP1P56278 107 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 DDI2Q5TDH0 399 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 TMEM42Q69YG0 159 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 UNQ9370/PRO34162Q6UXP9 181 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 TPRA1Q86W33 373 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 CROCCP3Q8IVE0 287 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 JAGN1Q8N5M9 183 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 CELF2-AS1Q8N7Q2 184 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 DNAAF1Q8NEP3 725 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 OR10AD1Q8NGE0 317 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 OR11L1Q8NGX0 322 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 TRMT10AQ8TBZ6 339 aaKnown RBP9.34□□□□□ -0.91
VARS2-210ENST00000490699 NPRL2Q8WTW4 380 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 NEU4Q8WWR8 484 aaPredicted RBP9.34□□□□□ -0.91
VARS2-210ENST00000490699 HPS1Q92902 700 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 TMIGD2Q96BF3 282 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 SOX7Q9BT81 388 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 TRAF4Q9BUZ4 470 aaPredicted RBP9.34□□□□□ -0.91
VARS2-210ENST00000490699 CACNG6Q9BXT2 260 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 FN3KRPQ9HA64 309 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 MYEF2Q9P2K5 600 aaKnown RBP9.34□□□□□ -0.91
VARS2-210ENST00000490699 IL19Q9UHD0 177 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 POLDIP2Q9Y2S7 368 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 ADGRG4Q8IZF6 3080 aa9.34□□□□□ -0.91
VARS2-210ENST00000490699 CADP27708 2225 aa9.33□□□□□ -0.92
VARS2-210ENST00000490699 LRP5LA4QPB2 252 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms