RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 VNN3Q9NY84 501 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF816-ZNF321PA0A0X1KG74 233 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 FAM183AA6NL82 134 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 ANXA2P2A6NMY6 339 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 APOC1P02654 83 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 EEF1B2P24534 225 aaKnown RBP10.15□□□□□ -0.78
CPSF3-204ENST00000489403 ACKR3P25106 362 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 SAA4P35542 130 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 OPRL1P41146 370 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 BLVRAP53004 296 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 MXRA7P84157 204 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 IL5RAQ01344 420 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 EGR3Q06889 387 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 DGUOKQ16854 277 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF788Q6ZQV5 615 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 CSNK2A3Q8NEV1 391 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 OR10Z1Q8NGY1 313 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 H1FXQ92522 213 aaKnown RBP10.15□□□□□ -0.78
CPSF3-204ENST00000489403 RPL3LQ92901 407 aaKnown RBP10.15□□□□□ -0.78
CPSF3-204ENST00000489403 PGAM5Q96HS1 289 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 GAFA1Q96PS6 74 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 RAB3IPQ96QF0 476 aaPredicted RBP10.15□□□□□ -0.78
CPSF3-204ENST00000489403 MICU1Q9BPX6 476 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 RTL8AQ9BWD3 113 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 DGCR6LQ9BY27 220 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 FGF23Q9GZV9 251 aaPredicted RBP10.15□□□□□ -0.78
CPSF3-204ENST00000489403 DNTTIP1Q9H147 329 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 OR10A2Q9H208 303 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 MED20Q9H944 212 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 CMC2Q9NRP2 79 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 HAO2Q9NYQ3 351 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 TAGLN3Q9UI15 199 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF391Q9UJN7 358 aa10.15□□□□□ -0.78
CPSF3-204ENST00000489403 TET2Q6N021 2002 aaPredicted RBP10.15□□□□□ -0.78
CPSF3-204ENST00000489403 TCRBV5S2A0A599 114 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 MEIOCA2RUB1 952 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 NKX6-3A6NJ46 265 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 ZNF850A8MQ14 1090 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 AKR7A2O43488 359 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 IFNGP01579 166 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 ZNF3P17036 446 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 TGFBR2P37173 567 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 PRDX4Q13162 271 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 MICAQ29983 383 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 C2orf68Q2NKX9 166 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 C16orf89Q6UX73 402 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 TIGD4Q8IY51 512 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 FTMTQ8N4E7 242 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 HPSE2Q8WWQ2 592 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 OR5P3Q8WZ94 311 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 LYZL4Q96KX0 146 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 NIPSNAP1Q9BPW8 284 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 RGCCQ9H4X1 137 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 ARL8BQ9NVJ2 186 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 ACTR3BQ9P1U1 418 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 SLC25A10Q9UBX3 287 aaPredicted RBP10.14□□□□□ -0.79
CPSF3-204ENST00000489403 MPC1Q9Y5U8 109 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 U3KQV3 271 aa10.14□□□□□ -0.79
CPSF3-204ENST00000489403 ANKRD61A6NGH8 418 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 TMEM210A6NLX4 147 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 RIIAD1A6NNX1 92 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 M0R1W7 72 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 SIGLEC5O15389 551 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 GLCEO94923 617 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 PAHP00439 452 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 CST4P01036 141 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 H2BFMP0C1H6 154 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 GSTT1P30711 240 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 DCTDP32321 178 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 UBE2E1P51965 193 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 ACSM1Q08AH1 577 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 SNCBQ16143 134 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 SPATS1Q496A3 300 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 FAM76BQ5HYJ3 339 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 SLC35E4Q6ICL7 350 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 C1orf122Q6ZSJ8 110 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 KCTD8Q6ZWB6 473 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 SHFQ7M4L6 423 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 IQCF1Q8N6M8 205 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 OR5R1Q8NH85 324 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 ANGPTL6Q8NI99 470 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 C17orf50Q8WW18 174 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 PIGCQ92535 297 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 OTULINQ96BN8 352 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 PPA2Q9H2U2 334 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 MAGIXQ9H6Y5 334 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 ELL3Q9HB65 397 aaPredicted RBP10.13□□□□□ -0.79
CPSF3-204ENST00000489403 ABCB9Q9NP78 766 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 NLKQ9UBE8 527 aa10.13□□□□□ -0.79
CPSF3-204ENST00000489403 SAMHD1Q9Y3Z3 626 aaKnown RBP10.13□□□□□ -0.79
CPSF3-204ENST00000489403 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 A0A1W2PQ09 198 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 H3BUX3 64 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 LYNP07948 512 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 CSF1P09603 554 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 NDUFB7P17568 137 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 CAV3P56539 151 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 NCR3LG1Q68D85 454 aa10.12□□□□□ -0.79
CPSF3-204ENST00000489403 OR2T5Q6IEZ7 315 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms