RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GABRA2P47869 451 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 SEC23BQ15437 767 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 TAF13Q15543 124 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 FGD3Q5JSP0 725 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 CCDC121Q6ZUS5 278 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 CBLL1Q75N03 491 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 C11orf42Q8N5U0 333 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 CYB561A3Q8NBI2 242 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 SDR9C7Q8NEX9 313 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 KCNJ15Q99712 375 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 ENPP4Q9Y6X5 453 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 U3KQK5 164 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 DYNC2H1Q8NCM8 4307 aaKnown RBP13.02□□□□□ -0.32
USP48-210ENST00000489108 TENM2Q9NT68 2774 aa13.02□□□□□ -0.32
USP48-210ENST00000489108 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 FAM90A8PA6NJQ4 464 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 OR2AT4A6NND4 320 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
USP48-210ENST00000489108 GNALP38405 381 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 VDAC2P45880 294 aaPredicted RBP13.02□□□□□ -0.33
USP48-210ENST00000489108 SLC7A2P52569 658 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 DGCR6Q14129 220 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 AGBL2Q5U5Z8 902 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 LYPD4Q6UWN0 246 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 DCXRQ7Z4W1 244 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 ZDHHC21Q8IVQ6 265 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 ZNRF4Q8WWF5 429 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 REEP6Q96HR9 211 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 HSH2DQ96JZ2 352 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 MICU1Q9BPX6 476 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 C19orf12Q9NSK7 152 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 NLKQ9UBE8 527 aa13.02□□□□□ -0.33
USP48-210ENST00000489108 BIRC6Q9NR09 4857 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 RYR2Q92736 4967 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 TRBV4-1A0A0J9YWV2 114 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 TCRBV4S1A1TA0A5B7 111 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 SYNGR1O43759 233 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 RHBDL1O75783 438 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 SLC6A6P31641 620 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 TIGD6Q17RP2 521 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 COQ5Q5HYK3 327 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 RNF144BQ7Z419 303 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 TMEM185AQ8NFB2 350 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 OR4C15Q8NGM1 316 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 OR5K1Q8NHB7 308 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 FANK1Q8TC84 345 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 SLAMF6Q96DU3 332 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 IFT27Q9BW83 186 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 PAPOLGQ9BWT3 736 aaKnown RBP13.01□□□□□ -0.33
USP48-210ENST00000489108 ABCB10Q9NRK6 738 aa13.01□□□□□ -0.33
USP48-210ENST00000489108 hCG_38984A0A1B0GV85 526 aa13□□□□□ -0.33
USP48-210ENST00000489108 CXCR6O00574 342 aa13□□□□□ -0.33
USP48-210ENST00000489108 NHLRC4P0CG21 123 aaPredicted RBP13□□□□□ -0.33
USP48-210ENST00000489108 PSG2P11465 335 aa13□□□□□ -0.33
USP48-210ENST00000489108 GSK3AP49840 483 aa13□□□□□ -0.33
USP48-210ENST00000489108 SPIBQ01892 262 aa13□□□□□ -0.33
USP48-210ENST00000489108 SLC35F1Q5T1Q4 408 aa13□□□□□ -0.33
USP48-210ENST00000489108 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
USP48-210ENST00000489108 TMEM200BQ69YZ2 307 aa13□□□□□ -0.33
USP48-210ENST00000489108 CENPVQ7Z7K6 275 aaPredicted RBP13□□□□□ -0.33
USP48-210ENST00000489108 RPS4Y2Q8TD47 263 aa13□□□□□ -0.33
USP48-210ENST00000489108 RTL8AQ9BWD3 113 aa13□□□□□ -0.33
USP48-210ENST00000489108 SP140LQ9H930 580 aa13□□□□□ -0.33
USP48-210ENST00000489108 GID8Q9NWU2 228 aa13□□□□□ -0.33
USP48-210ENST00000489108 CMTM6Q9NX76 183 aa13□□□□□ -0.33
USP48-210ENST00000489108 PITPNC1Q9UKF7 332 aa13□□□□□ -0.33
USP48-210ENST00000489108 PCDHGB5Q9Y5G0 923 aa13□□□□□ -0.33
USP48-210ENST00000489108 TSSC4Q9Y5U2 329 aaPredicted RBP13□□□□□ -0.33
USP48-210ENST00000489108 A0A0G2JND7 137 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 ANXA2P2A6NMY6 339 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 SERPINA1P01009 418 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 ANXA2P07355 339 aaKnown RBP12.99□□□□□ -0.33
USP48-210ENST00000489108 GLRA1P23415 457 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 CAPZA1P52907 286 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 IL5RAQ01344 420 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP48-210ENST00000489108 SSX2Q16385 188 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 LDLRAD2Q5SZI1 272 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 PROKR2Q8NFJ6 384 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 OR51L1Q8NGJ5 315 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 DYDC1Q8WWB3 177 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
USP48-210ENST00000489108 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
USP48-210ENST00000489108 ZNF319Q9P2F9 582 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 ZNF222Q9UK12 451 aa12.99□□□□□ -0.33
USP48-210ENST00000489108 FAM32AQ9Y421 112 aaKnown RBP12.99□□□□□ -0.33
USP48-210ENST00000489108 SACSQ9NZJ4 4579 aa12.98□□□□□ -0.33
USP48-210ENST00000489108 TMEM210A6NLX4 147 aa12.98□□□□□ -0.33
USP48-210ENST00000489108 ZNF850A8MQ14 1090 aa12.98□□□□□ -0.33
USP48-210ENST00000489108 GSTA4O15217 222 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms