RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 HNRNPKP61978 463 aaKnown RBP eCLIP14.37□□□□□ -0.11
MCF2L-229ENST00000488765 RAB1AP62820 205 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF260Q3ZCT1 412 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 COL13A1Q5TAT6 717 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-229ENST00000488765 COMMD1Q8N668 190 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 ZDHHC22Q8N966 263 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 PBDC1Q9BVG4 233 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 Q9N2J8 555 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 MYOZ1Q9NP98 299 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-229ENST00000488765 SLC17A5Q9NRA2 495 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 GRHPRQ9UBQ7 328 aa14.37□□□□□ -0.11
MCF2L-229ENST00000488765 TMEM269A0A1B0GVZ9 245 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 K7EQS6 105 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 CLEC3AO75596 197 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 NXPH3O95157 252 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 SFT2D2O95562 160 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ACAA2P42765 397 aaKnown RBP14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ALDH3B1P43353 468 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 PMS2P11Q13670 270 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 HERPUD1Q15011 391 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF595Q8IYB9 648 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 OR52N4Q8NGI2 321 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 C17orf51A8MQB3 221 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 TOX3O15405 576 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-229ENST00000488765 OR6A2O95222 327 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ALG10Q5BKT4 473 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 TSPO2Q5TGU0 170 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 DPY19L2P2Q6ZN68 376 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 M1APQ8TC57 530 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 CRISPLD2Q9H0B8 497 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 FOXD3Q9UJU5 478 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-229ENST00000488765 TRIOBPQ9H2D6 2365 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 P2RY10O00398 339 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 SOCS1O15524 211 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 LINC00271P0C7V0 271 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 DANCRP0C864 163 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 DCAF7P61962 342 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 UNC119Q13432 240 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF77Q15935 545 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 EXD3Q8N9H8 876 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 POC1AQ8NBT0 407 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 PLPP5Q8NEB5 264 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 MRPL24Q96A35 216 aaKnown RBP14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ARRDC3Q96B67 414 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 FGGYQ96C11 551 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 PRRX2Q99811 253 aa14.36□□□□□ -0.11
MCF2L-229ENST00000488765 ARFRP1Q13795 201 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 PDGFRLQ15198 375 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF658BQ4V348 819 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-229ENST00000488765 C9orf50Q5SZB4 431 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 LINC00346Q8IVM7 164 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 OR2L3Q8NG85 312 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 NUS1Q96E22 293 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 LMLNQ96KR4 655 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 CDC6Q99741 560 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 KLHDC3Q9BQ90 382 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 RTBDNQ9BSG5 229 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-229ENST00000488765 PELI2Q9HAT8 420 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 CENPMQ9NSP4 180 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 SEC16AO15027 2179 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 A0A1B0GUS0 222 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 IGLON5A6NGN9 336 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 MPIG6BO95866 241 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 IRF2P14316 349 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 PNLIPP16233 465 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 OR3A2P47893 321 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 HNF4GQ14541 408 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 HOGA1Q86XE5 327 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 OR5D18Q8NGL1 313 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 ADAMTS18Q8TE60 1221 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 HAS2Q92819 552 aa14.35□□□□□ -0.11
MCF2L-229ENST00000488765 XKRY2A2RUG3 117 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RBFOX3A6NFN3 312 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 XKRYO14609 159 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 CD1AP06126 327 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 SLC25A1P53007 311 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 PCK2Q16822 640 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 CDC20BQ86Y33 519 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RNASE8Q8TDE3 154 aaKnown RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RPP25Q9BUL9 199 aaKnown RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 NMNAT2Q9BZQ4 307 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 CCDC187A0A096LP49 1063 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 A6NIZ1 184 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF705FA8MVS1 300 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 HSD17B6O14756 317 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF705DP0CH99 300 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 ZNF705BP0CI00 300 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 PLA2G5P39877 138 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 GRK6P43250 576 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 NOVA1P51513 510 aaKnown RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 MLF1P58340 268 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RAP1BP61224 184 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 GPM6BQ13491 265 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 C1orf189Q5VU69 101 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 PSRC1Q6PGN9 363 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 SUMF1Q8NBK3 374 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 TMEM52Q8NDY8 209 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RAB18Q9NP72 206 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms