RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 INSM1Q01101 510 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-210ENST00000487017 THSD4Q6ZMP0 1018 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 OR2A5Q96R48 311 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 SERGEFQ9UGK8 458 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 CYB5R1Q9UHQ9 305 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 V9GYH0 126 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 AQP7P3A6NL99 342 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 CDC42EP2O14613 210 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 NAT1P18440 290 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 TAS2R45P59539 299 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 DHRS2Q13268 280 aa14.75□□□□□ -0.05
COL7A1-210ENST00000487017 LMO7DNF2Z398 122 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 DSCR4P56555 118 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-210ENST00000487017 PPIAP62937 165 aaKnown RBP14.74□□□□□ -0.05
COL7A1-210ENST00000487017 SIGIRRQ6IA17 410 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 LILRA6Q6PI73 481 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 COMMD1Q8N668 190 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ST6GAL2Q96JF0 529 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 PRRX2Q99811 253 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 EGLN1Q9GZT9 426 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 RAB18Q9NP72 206 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 MMP26Q9NRE1 261 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 TRBV5-3A0A0A0MS03 114 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 RRP8O43159 456 aaKnown RBP14.74□□□□□ -0.05
COL7A1-210ENST00000487017 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ETFBKMTQ8IXQ9 262 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ABCD4O14678 606 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 GPANK1O95872 356 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 CST4P01036 141 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 FABP1P07148 127 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 PINX1Q96BK5 328 aaKnown RBP14.74□□□□□ -0.05
COL7A1-210ENST00000487017 CCL27Q9Y4X3 112 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 GPR31O00270 319 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 CD160O95971 181 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 HIST1H1DP16402 221 aaKnown RBP14.74□□□□□ -0.05
COL7A1-210ENST00000487017 CD96P40200 585 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 MYBPHQ13203 477 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 NCR3LG1Q68D85 454 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ZNF547Q8IVP9 402 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 OR2V1Q8NHB1 315 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 AKR7LQ8NHP1 331 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ROBO4Q8WZ75 1007 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 SPSB1Q96BD6 273 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 CHST6Q9GZX3 395 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 FBXO34Q9NWN3 711 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 LINC01565O15544 149 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ANGPTL7O43827 346 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 GABRG2P18507 467 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 DUSP2Q05923 314 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 PPP1R1AQ13522 171 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ZIC1Q15915 447 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ADGRG3Q86Y34 549 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ZNF764Q96H86 408 aaPredicted RBP14.74□□□□□ -0.05
COL7A1-210ENST00000487017 TAAR6Q96RI8 345 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ABHD1Q96SE0 405 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 C12orf10Q9HB07 376 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 CBY1Q9Y3M2 126 aa14.74□□□□□ -0.05
COL7A1-210ENST00000487017 ANKRD20A5PA0PJZ0 165 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 CDKN2AP42771 156 aaKnown RBP14.73□□□□□ -0.05
COL7A1-210ENST00000487017 FMODQ06828 376 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 IP6K3Q96PC2 410 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 CLCF1Q9UBD9 225 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 SFT2D2O95562 160 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 FAM157BP0CG42 384 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 NTF3P20783 257 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 SLC6A1P30531 599 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 FUT7Q11130 342 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 PLA1AQ53H76 456 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 PRSS41Q7RTY9 318 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 OR1J1Q8NGS3 322 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 LAMP3Q9UQV4 416 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 PMS2P1A4D2B8 440 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 RRASP10301 218 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 OR1F12Q8NHA8 337 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 FOXQ1Q9C009 403 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 NME1P15531 152 aaKnown RBP14.73□□□□□ -0.05
COL7A1-210ENST00000487017 CSF2RBP32927 897 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 ZNF141Q15928 474 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 DEGS2Q6QHC5 323 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 LRRTM1Q86UE6 522 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 OR10X1Q8NGY0 326 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 ARHGAP5-AS1Q96IT6 56 aa14.73□□□□□ -0.05
COL7A1-210ENST00000487017 CYTIPO60759 359 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 EPPINO95925 133 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 HOXB3P14651 431 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 FUT3P21217 361 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 RTL8BQ17RB0 113 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 CEACAM16Q2WEN9 425 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 C4orf17Q53FE4 359 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 DMKNQ6E0U4 476 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 SCN1AP35498 2009 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 C9orf170A2RU37 121 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 METTL12A8MUP2 240 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 SHISA8B8ZZ34 492 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 CSN1S1P47710 185 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 TIGITQ495A1 244 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 FOXB1Q99853 325 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 SLC35D1Q9NTN3 355 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 ATP23Q9Y6H3 246 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 OR5G3P0C626 314 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms