RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SUMO3P55854 103 aaPredicted RBP10.76□□□□□ -0.69
COL3A1-206ENST00000487010 CLRN1P58418 232 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 SNRPEP62304 92 aaKnown RBP10.76□□□□□ -0.69
COL3A1-206ENST00000487010 RNF4P78317 190 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 SURF2Q15527 256 aaPredicted RBP10.76□□□□□ -0.69
COL3A1-206ENST00000487010 C17orf82Q86X59 251 aaPredicted RBP10.76□□□□□ -0.69
COL3A1-206ENST00000487010 FOXRED2Q8IWF2 684 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 OR51T1Q8NGJ9 327 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 MRPL38Q96DV4 380 aaKnown RBP10.76□□□□□ -0.69
COL3A1-206ENST00000487010 CLCC1Q96S66 551 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 TIMM10BQ9Y5J6 103 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 SEC16AO15027 2179 aa10.76□□□□□ -0.69
COL3A1-206ENST00000487010 EXPH5Q8NEV8 1989 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 IGKV1-9A0A0C4DH69 117 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 FOXI3A8MTJ6 420 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 SHISA8B8ZZ34 492 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 LINC01387J3KSC0 135 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 K7EPK0 472 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 IFNA2P01563 188 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 GAPDHP04406 335 aaKnown RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 FOSL2P15408 326 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 NME1P15531 152 aaKnown RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 EN2P19622 333 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 CDAP32320 146 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 PTGER4P35408 488 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 ID4P47928 161 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 ARL4DP49703 201 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 GABREP78334 506 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 C1orf189Q5VU69 101 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 ETV3LQ6ZN32 361 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 Q6ZRG5 221 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 DOK3Q7L591 496 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 FAM71E2Q8N5Q1 922 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 MAFIPQ8WZ33 124 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 C14orf79Q96F83 325 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 AKR1E2Q96JD6 320 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 SLC22A11Q9NSA0 550 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 C1orf123Q9NWV4 160 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 C14orf166Q9Y224 244 aaKnown RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 IGHV3-20A0A0C4DH32 117 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 C1orf196B1AJZ1 125 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 EFNA2O43921 213 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 JTBO76095 146 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 KNG1P01042 644 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 OR8U9P0C7N5 309 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 PGA4P0DJD7 388 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 PGA3P0DJD8 388 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 FCGR2CP31995 323 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF84P51523 738 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 MFAP5Q13361 173 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 UEVLDQ8IX04 471 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 NOXO1Q8NFA2 376 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 OR8U1Q8NH10 309 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 HIST1H2BAQ96A08 127 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 PECRQ9BY49 303 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 PNRC2Q9NPJ4 139 aaKnown RBP10.75□□□□□ -0.69
COL3A1-206ENST00000487010 FBXL17Q9UF56 701 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 EDARQ9UNE0 448 aa10.75□□□□□ -0.69
COL3A1-206ENST00000487010 C5orf52A6NGY3 159 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 RER1O15258 196 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 DEDDO75618 318 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 IGHG1P01857 330 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 HPNP05981 417 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 BLVRBP30043 206 aaPredicted RBP10.74□□□□□ -0.69
COL3A1-206ENST00000487010 RBMXP38159 391 aaKnown RBP10.74□□□□□ -0.69
COL3A1-206ENST00000487010 CSNK1EP49674 416 aaKnown RBP10.74□□□□□ -0.69
COL3A1-206ENST00000487010 FAM3AP98173 230 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 HGFACQ04756 655 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 MYBPHQ13203 477 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 SHHQ15465 462 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 HMGN3Q15651 99 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 DEFB133Q30KQ1 61 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 CHRFAM7AQ494W8 412 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 RNF212Q495C1 297 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 SLC25A47Q6Q0C1 308 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 OPN5Q6U736 354 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 FAM57BQ71RH2 274 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 C1QL2Q7Z5L3 287 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 PLPP5Q8NEB5 264 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 OR14K1Q8NGZ2 314 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 NANPQ8TBE9 248 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 GHRLQ9UBU3 117 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 TUBD1Q9UJT1 453 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 ADAMTS9Q9P2N4 1935 aa10.74□□□□□ -0.69
COL3A1-206ENST00000487010 GLAP06280 429 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 PRF1P14222 555 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 CPT2P23786 658 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 ALDH3B1P43353 468 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 TMEM33P57088 247 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 ACY1Q03154 408 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 SMCO1Q147U7 214 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 KISS1Q15726 138 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 SMAD2Q15796 467 aaKnown RBP10.73□□□□□ -0.69
COL3A1-206ENST00000487010 CRIP3Q6Q6R5 217 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 SHISA6Q6ZSJ9 500 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms