RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PRR23D2P0DMB1 279 aaPredicted RBP14.14□□□□□ -0.15
SMC4-216ENST00000485645 POU1F1P28069 291 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
SMC4-216ENST00000485645 RELBQ01201 579 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 DUX4L9Q6RFH8 374 aaPredicted RBP14.14□□□□□ -0.15
SMC4-216ENST00000485645 VMO1Q7Z5L0 202 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 PDZD9Q8IXQ8 264 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 FGFRL1Q8N441 504 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 LY6G5BQ8NDX9 201 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 OTOSQ8NHW6 89 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 THEM6Q8WUY1 208 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 ITPKCQ96DU7 683 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 SEH1LQ96EE3 360 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 DMRTB1Q96MA1 342 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 RTL8AQ9BWD3 113 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 ONECUT1Q9UBC0 465 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 DUX4Q9UBX2 424 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 MPC1Q9Y5U8 109 aa14.14□□□□□ -0.15
SMC4-216ENST00000485645 A0A1B0GVI7 797 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 AQP12BA6NM10 295 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.13□□□□□ -0.15
SMC4-216ENST00000485645 GNGT2O14610 69 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 SRSF4Q08170 494 aaKnown RBP14.13□□□□□ -0.15
SMC4-216ENST00000485645 PRDX4Q13162 271 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 GINS1Q14691 196 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 LRRC10Q5BKY1 277 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 PLBD1Q6P4A8 553 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 LDLRAD3Q86YD5 345 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 AQP12AQ8IXF9 295 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 CMTM4Q8IZR5 234 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 FAM216BQ8N7L0 139 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 ZNF454Q8N9F8 522 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 ABCB9Q9NP78 766 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 HAO2Q9NYQ3 351 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 PDP1Q9P0J1 537 aaPredicted RBP14.13□□□□□ -0.15
SMC4-216ENST00000485645 DNAJB11Q9UBS4 358 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 FAM96BQ9Y3D0 163 aa14.13□□□□□ -0.15
SMC4-216ENST00000485645 TMEM210A6NLX4 147 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 ZNF850A8MQ14 1090 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 GSC2O15499 205 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 SELENOFO60613 162 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 CST4P01036 141 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 IGHV4-59P01825 116 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 HOXB6P17509 224 aaKnown RBP14.12□□□□□ -0.15
SMC4-216ENST00000485645 IER3P46695 156 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 GMFBP60983 142 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 IKZF1Q13422 519 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 ATPAF1Q5TC12 328 aaPredicted RBP14.12□□□□□ -0.15
SMC4-216ENST00000485645 STUMQ69YW2 141 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 BRICD5Q6PL45 260 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 KCTD8Q6ZWB6 473 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 ADGRG5Q8IZF4 528 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 OR5T2Q8NGG2 359 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 OR10Z1Q8NGY1 313 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 OR5P3Q8WZ94 311 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 PIGCQ92535 297 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 DNTTIP1Q9H147 329 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 DPAGT1Q9H3H5 408 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 NIPAL2Q9H841 368 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 ZNF556Q9HAH1 456 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 ZNF391Q9UJN7 358 aa14.12□□□□□ -0.15
SMC4-216ENST00000485645 CAB39Q9Y376 341 aaPredicted RBP14.12□□□□□ -0.15
SMC4-216ENST00000485645 PRODHO43272 600 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 GPR137BO60478 399 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 ATP5HO75947 161 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 HMGN1P05114 100 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 AMY2BP19961 511 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 ACKR3P25106 362 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 TGM4P49221 684 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 RASSF2P50749 326 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 FLOT2Q14254 428 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 METAP1DQ6UB28 335 aaPredicted RBP14.11□□□□□ -0.15
SMC4-216ENST00000485645 TMEM179BQ7Z7N9 219 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 CPOQ8IVL8 374 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 NPRL2Q8WTW4 380 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 CANT1Q8WVQ1 401 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 LRTOMTQ8WZ04 291 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 RPL3LQ92901 407 aaKnown RBP14.11□□□□□ -0.15
SMC4-216ENST00000485645 RNF170Q96K19 258 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 RAB3IPQ96QF0 476 aaPredicted RBP14.11□□□□□ -0.15
SMC4-216ENST00000485645 HIST1H2AAQ96QV6 131 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 PKP2Q99959 881 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 DCTN5Q9BTE1 182 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 CADM1Q9BY67 442 aaKnown RBP14.11□□□□□ -0.15
SMC4-216ENST00000485645 SNTG1Q9NSN8 517 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 POMPQ9Y244 141 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 RNF114Q9Y508 228 aa14.11□□□□□ -0.15
SMC4-216ENST00000485645 NKX6-3A6NJ46 265 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 AKR7A2O43488 359 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 E2F6O75461 281 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 OSMP13725 252 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 PSMA6P60900 246 aaKnown RBP14.1□□□□□ -0.15
SMC4-216ENST00000485645 RPS7P62081 194 aaKnown RBP14.1□□□□□ -0.15
SMC4-216ENST00000485645 CDK5Q00535 292 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 DEFA6Q01524 100 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 GUCA2AQ02747 115 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 FAM76BQ5HYJ3 339 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 SLC35D3Q5M8T2 416 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 GDPGP1Q6ZNW5 385 aa14.1□□□□□ -0.15
SMC4-216ENST00000485645 ZDHHC23Q8IYP9 409 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms