RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 MYOZ1Q9NP98 299 aaPredicted RBP13.04□□□□□ -0.32
CCM2-215ENST00000482714 SF3B6Q9Y3B4 125 aaKnown RBP13.04□□□□□ -0.32
CCM2-215ENST00000482714 HRNRQ86YZ3 2850 aaPredicted RBP13.04□□□□□ -0.32
CCM2-215ENST00000482714 ANKRD61A6NGH8 418 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 OR5B21A6NL26 309 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 TMEM210A6NLX4 147 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 ZNF850A8MQ14 1090 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 ZNF879B4DU55 563 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 MLNRO43193 412 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 LILRA1O75019 489 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 INMTO95050 263 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 FAHP16930 419 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 ZNF20P17024 532 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 PSMB9P28065 219 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 CD200P41217 278 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 GATA4P43694 442 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 TNFAIP6P98066 277 aaPredicted RBP13.04□□□□□ -0.32
CCM2-215ENST00000482714 DOC2BQ14184 412 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 ZDHHC23Q8IYP9 409 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 DNAAF1Q8NEP3 725 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 OR51A4Q8NGJ6 313 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 OR8S1Q8NH09 359 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 TSEN15Q8WW01 171 aaKnown RBP13.04□□□□□ -0.32
CCM2-215ENST00000482714 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 MUL1Q969V5 352 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 ITPKCQ96DU7 683 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 ZCCHC4Q9H5U6 513 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 DLL4Q9NR61 685 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 SLC7A11Q9UPY5 501 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 PLEKHA6Q9Y2H5 1048 aa13.04□□□□□ -0.32
CCM2-215ENST00000482714 USF3Q68DE3 2245 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 CSMD1Q96PZ7 3565 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 SC5DO75845 299 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 PRKACBP22694 351 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 CDKN1AP38936 164 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 CRYBB2P43320 205 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 FUT6P51993 359 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 CNN3Q15417 329 aaKnown RBP13.03□□□□□ -0.32
CCM2-215ENST00000482714 NEDD8Q15843 81 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 TSTQ16762 297 aaKnown RBP13.03□□□□□ -0.32
CCM2-215ENST00000482714 ACSM3Q53FZ2 586 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 OR10AC1Q8NH08 325 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 RGP1Q92546 391 aaPredicted RBP13.03□□□□□ -0.32
CCM2-215ENST00000482714 NRGNQ92686 78 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 TMEM106AQ96A25 262 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 SPSB1Q96BD6 273 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
CCM2-215ENST00000482714 ADAT1Q9BUB4 502 aaKnown RBP13.03□□□□□ -0.32
CCM2-215ENST00000482714 RTL8AQ9BWD3 113 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 FOXJ3Q9UPW0 622 aa13.03□□□□□ -0.32
CCM2-215ENST00000482714 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 ATF1P18846 271 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 PRSS12P56730 875 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 GNG3P63215 75 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 MAB21L1Q13394 359 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 ZNF529Q6P280 563 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 CD200R1LQ6Q8B3 271 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 PRSS57Q6UWY2 283 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 GDPGP1Q6ZNW5 385 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 MOB3CQ70IA8 216 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 ZCCHC24Q8N2G6 241 aaKnown RBP13.02□□□□□ -0.33
CCM2-215ENST00000482714 UBASH3BQ8TF42 649 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 RNF170Q96K19 258 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 SAP30LQ9HAJ7 183 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 CKLFQ9UBR5 152 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 ARID1AO14497 2285 aa13.02□□□□□ -0.33
CCM2-215ENST00000482714 MYO9AB2RTY4 2548 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 TRBV5-7A0A0A0MS05 114 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 TRDV1A0A1B0GX56 115 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 MEGF11A6BM72 1044 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 H0YL77 283 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
CCM2-215ENST00000482714 ARL6IP5O75915 188 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 ALDOBP05062 364 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 TGFBR2P37173 567 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 MAGEB1P43366 347 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 PTH2RP49190 550 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 DSCR9P59020 149 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 CCL8P80075 99 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 UBE2V2Q15819 145 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 SSX1Q16384 188 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 ZNF181Q2M3W8 571 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 CDH26Q8IXH8 852 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 RDH5Q92781 318 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 MEGF10Q96KG7 1140 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 OR2V2Q96R30 315 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 TMED9Q9BVK6 235 aa13.01□□□□□ -0.33
CCM2-215ENST00000482714 F5H5P2 479 aa13□□□□□ -0.33
CCM2-215ENST00000482714 MAGEB3O15480 346 aa13□□□□□ -0.33
CCM2-215ENST00000482714 CSF3P09919 207 aa13□□□□□ -0.33
CCM2-215ENST00000482714 SMIM18P0DKX4 95 aa13□□□□□ -0.33
CCM2-215ENST00000482714 RAB3AP20336 220 aa13□□□□□ -0.33
CCM2-215ENST00000482714 FGF9P31371 208 aaPredicted RBP13□□□□□ -0.33
CCM2-215ENST00000482714 CFHR2P36980 270 aa13□□□□□ -0.33
CCM2-215ENST00000482714 SOX2P48431 317 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms