RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
HDAC1-208ENST00000482310 UFSP2Q9NUQ7 469 aa11.24□□□□□ -0.61
HDAC1-208ENST00000482310 CGGBP1Q9UFW8 167 aaPredicted RBP11.24□□□□□ -0.61
HDAC1-208ENST00000482310 ITGB1BP2Q9UKP3 347 aa11.24□□□□□ -0.61
HDAC1-208ENST00000482310 ZDHHC8Q9ULC8 765 aa11.24□□□□□ -0.61
HDAC1-208ENST00000482310 EDARQ9UNE0 448 aa11.24□□□□□ -0.61
HDAC1-208ENST00000482310 F8P00451 2351 aa11.24□□□□□ -0.61
HDAC1-208ENST00000482310 MAP1AP78559 2803 aaPredicted RBP11.23□□□□□ -0.61
HDAC1-208ENST00000482310 AKAP9Q99996 3911 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
HDAC1-208ENST00000482310 ANXA2P2A6NMY6 339 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 H7C417 338 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 SSX4O60224 188 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 GMDSO60547 372 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 OCMP0CE72 109 aaPredicted RBP11.23□□□□□ -0.61
HDAC1-208ENST00000482310 CPEP16870 476 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 ZNF12P17014 697 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 GPM6AP51674 278 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 GP2P55259 537 aaKnown RBP11.23□□□□□ -0.61
HDAC1-208ENST00000482310 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDAC1-208ENST00000482310 SSX1Q16384 188 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 DEFB113Q30KQ7 82 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 YIF1BQ5BJH7 314 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 CLVS2Q5SYC1 327 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 TGIF2LYQ8IUE0 185 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 PHC2Q8IXK0 858 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 OR13C9Q8NGT0 318 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 UBASH3BQ8TF42 649 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 HPSE2Q8WWQ2 592 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 MUL1Q969V5 352 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 TMEM106AQ96A25 262 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 FGF23Q9GZV9 251 aaPredicted RBP11.23□□□□□ -0.61
HDAC1-208ENST00000482310 TAS2R4Q9NYW5 299 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
HDAC1-208ENST00000482310 FAM230AA0A1W2PPH8 454 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 A6NLC8 198 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 PLATP00750 562 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 CST4P01036 141 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 THBS2P35442 1172 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 TPBGQ13641 420 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 FAM27D1Q5T7N8 215 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 MOGAT3Q86VF5 341 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 ZNF525Q8N782 197 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 ZNF420Q8TAQ5 688 aaPredicted RBP11.22□□□□□ -0.61
HDAC1-208ENST00000482310 RFT1Q96AA3 541 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 RNF170Q96K19 258 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 SPACA5Q96QH8 159 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
HDAC1-208ENST00000482310 MICU1Q9BPX6 476 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 RTL8AQ9BWD3 113 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 MRPS26Q9BYN8 205 aaKnown RBP11.22□□□□□ -0.61
HDAC1-208ENST00000482310 CHST5Q9GZS9 411 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 EGLN1Q9GZT9 426 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 CXXC4Q9H2H0 198 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 ISYNA1Q9NPH2 558 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 NKIRAS2Q9NYR9 191 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 MPC1Q9Y5U8 109 aa11.22□□□□□ -0.61
HDAC1-208ENST00000482310 VPS13CQ709C8 3753 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 LOC100289279A0A1B0GTE1 492 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 hCG_1807616A0A1W2PRN6 198 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 ZNF879B4DU55 563 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 ZNF732B4DXR9 585 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 CCRL2O00421 344 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 RGS9O75916 674 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 SERPINA3P01011 423 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 CD2P06729 351 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 HCKP08631 526 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 DAOP14920 347 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 GMFBP60983 142 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 HOXA4Q00056 320 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 MAB21L1Q13394 359 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 MPPED2Q15777 294 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 UBE2V2Q15819 145 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 PCGF3Q3KNV8 242 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 Q499Y3 187 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 ACSM3Q53FZ2 586 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 ZBTB37Q5TC79 503 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 WDR86Q86TI4 376 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 BATF2Q8N1L9 274 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 CCDC54Q8NEL0 328 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 OR5P3Q8WZ94 311 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 RPL3LQ92901 407 aaKnown RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 YIPF5Q969M3 257 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 ITPKCQ96DU7 683 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 DIRC2Q96SL1 478 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 SLC22A4Q9H015 551 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 EXOSC4Q9NPD3 245 aaKnown RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 NOX4Q9NPH5 578 aa11.21□□□□□ -0.61
HDAC1-208ENST00000482310 BEX4Q9NWD9 120 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 FBXO9Q9UK97 447 aaPredicted RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 NOP16Q9Y3C1 178 aaKnown RBP11.21□□□□□ -0.61
HDAC1-208ENST00000482310 C2CD3Q4AC94 2353 aa11.2□□□□□ -0.62
HDAC1-208ENST00000482310 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
HDAC1-208ENST00000482310 IGHV1-69-2A0A0G2JMI3 117 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms