RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 NSRP1Q9H0G5 558 aaKnown RBP12□□□□□ -0.49
HDAC6-224ENST00000481929 NLKQ9UBE8 527 aa12□□□□□ -0.49
HDAC6-224ENST00000481929 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
HDAC6-224ENST00000481929 N6AMT1Q9Y5N5 214 aa12□□□□□ -0.49
HDAC6-224ENST00000481929 SNX13Q9Y5W8 968 aa12□□□□□ -0.49
HDAC6-224ENST00000481929 hCG_1809904A0A1W2PP81 198 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 A0A1W2PPE2 198 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 A0A1W2PR64 198 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 A0A1W2PRV1 198 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 OR2AT4A6NND4 320 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 H0YHG0 523 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 AKR7A2O43488 359 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 SLC2A1P11166 492 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 SELENOWP63302 87 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 CYLC2Q14093 348 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-224ENST00000481929 CROCCP2Q86T23 111 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 ZNRF1Q8ND25 227 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 OR51D1Q8NGF3 324 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 RSRC1Q96IZ7 334 aaKnown RBP11.99□□□□□ -0.49
HDAC6-224ENST00000481929 ERMAPQ96PL5 475 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-224ENST00000481929 NMNAT3Q96T66 252 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 ASCL2Q99929 193 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 COPS4Q9BT78 406 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 PALMDQ9NP74 551 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 RPRD1BQ9NQG5 326 aaKnown RBP11.99□□□□□ -0.49
HDAC6-224ENST00000481929 C19orf12Q9NSK7 152 aa11.99□□□□□ -0.49
HDAC6-224ENST00000481929 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-224ENST00000481929 TBL2Q9Y4P3 447 aaKnown RBP11.99□□□□□ -0.49
HDAC6-224ENST00000481929 DNAH1Q9P2D7 4330 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 ANXA2P2A6NMY6 339 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 LYL1P12980 280 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 ZNF823P16415 610 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 KDELR2P33947 212 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 PRKXP51817 358 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 CAPZA1P52907 286 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 SLC25A1P53007 311 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 ERVFRD-1P60508 538 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 IL5RAQ01344 420 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 SSX2Q16385 188 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 SLC16A9Q7RTY1 509 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 TSPEARQ8WU66 669 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 TFAP2CQ92754 450 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 MALSU1Q96EH3 234 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 PAPOLGQ9BWT3 736 aaKnown RBP11.98□□□□□ -0.49
HDAC6-224ENST00000481929 TMEM120AQ9BXJ8 343 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 MRPL22Q9NWU5 206 aaKnown RBP11.98□□□□□ -0.49
HDAC6-224ENST00000481929 LRP12Q9Y561 859 aa11.98□□□□□ -0.49
HDAC6-224ENST00000481929 H3BUI4 141 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 TBX1O43435 398 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 RAMP3O60896 148 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 RHBDL1O75783 438 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 ARG1P05089 322 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 NOS3P29474 1203 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 FXYD6P3P58550 94 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 FAM3AP98173 230 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 AGBL2Q5U5Z8 902 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 ZNF782Q6ZMW2 699 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-224ENST00000481929 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 VTCN1Q7Z7D3 282 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 ZBTB46Q86UZ6 589 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 C11orf42Q8N5U0 333 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 OR8J3Q8NGG0 315 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 RPL3LQ92901 407 aaKnown RBP11.97□□□□□ -0.49
HDAC6-224ENST00000481929 LYSTQ99698 3801 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 ZNF649Q9BS31 505 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 RTL8AQ9BWD3 113 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 ANKRD19PQ9H560 264 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 PPP1R3EQ9H7J1 279 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 USE1Q9NZ43 259 aa11.97□□□□□ -0.49
HDAC6-224ENST00000481929 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
HDAC6-224ENST00000481929 IGKV1D-17A0A075B6S4 117 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 TMEM210A6NLX4 147 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 GLRA1P23415 457 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 AZGP1P25311 298 aaKnown RBP11.96□□□□□ -0.49
HDAC6-224ENST00000481929 RPS27P42677 84 aaKnown RBP11.96□□□□□ -0.49
HDAC6-224ENST00000481929 DYNLT3P51808 116 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 RPL31P62899 125 aaKnown RBP11.96□□□□□ -0.49
HDAC6-224ENST00000481929 TAF13Q15543 124 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 TIGD6Q17RP2 521 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 WDR93Q6P2C0 686 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 ZDHHC21Q8IVQ6 265 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 OR4K13Q8NH42 304 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 REEP6Q96HR9 211 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 KCNJ15Q99712 375 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 FN3KQ9H479 309 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 RHBDD3Q9Y3P4 386 aa11.96□□□□□ -0.49
HDAC6-224ENST00000481929 UNC119BA6NIH7 251 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 PSG2P11465 335 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
HDAC6-224ENST00000481929 CCL3L1P16619 93 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 SNCBQ16143 134 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 TMEM200BQ69YZ2 307 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 KCTD18Q6PI47 426 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-224ENST00000481929 SMARCD3Q6STE5 483 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 KCTD8Q6ZWB6 473 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 FTMTQ8N4E7 242 aa11.95□□□□□ -0.5
HDAC6-224ENST00000481929 CSNK2A3Q8NEV1 391 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms