RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NOP16Q9Y3C1 178 aaKnown RBP13.79□□□□□ -0.2
VHL-203ENST00000477538 LOC100506127A0A0U1RQW1 187 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 A0A1B0GWJ7 208 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 ANXA2P2A6NMY6 339 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 C17orf100A8MU93 164 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 H0YL77 283 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 PIN1P1O15428 100 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 SPRY3O43610 288 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 UCHL1P09936 223 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 FSTP19883 344 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 PPOXP50336 477 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 BLMHQ13867 455 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 CEP78Q5JTW2 689 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 ASPHD2Q6ICH7 369 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 UTS2BQ765I0 119 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 SATL1Q86VE3 508 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 OR2Z1Q8NG97 314 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 OR13C9Q8NGT0 318 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 OR8S1Q8NH09 359 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 PHYHIPQ92561 330 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 TXNL4BQ9NX01 149 aaKnown RBP13.78□□□□□ -0.2
VHL-203ENST00000477538 CKLFQ9UBR5 152 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 ZDHHC8Q9ULC8 765 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 ANKRD17O75179 2603 aaKnown RBP13.78□□□□□ -0.2
VHL-203ENST00000477538 CELSR2Q9HCU4 2923 aa13.78□□□□□ -0.2
VHL-203ENST00000477538 HECTD1Q9ULT8 2610 aa13.77□□□□□ -0.2
VHL-203ENST00000477538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.77□□□□□ -0.21
VHL-203ENST00000477538 SULT1B1O43704 296 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 AIREO43918 545 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 ARL6IP5O75915 188 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 IGHV1-46P01743 117 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 BMP4P12644 408 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 PRF1P14222 555 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 FGF9P31371 208 aaPredicted RBP13.77□□□□□ -0.21
VHL-203ENST00000477538 UBE2V2Q15819 145 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 HSD17B12Q53GQ0 312 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 DMRTC1Q5HYR2 192 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 C22orf42Q6IC83 251 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 ABCA12Q86UK0 2595 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 ZCCHC24Q8N2G6 241 aaKnown RBP13.77□□□□□ -0.21
VHL-203ENST00000477538 HPSE2Q8WWQ2 592 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 OR5P3Q8WZ94 311 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 RPL3LQ92901 407 aaKnown RBP13.77□□□□□ -0.21
VHL-203ENST00000477538 ITPKCQ96DU7 683 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 TECTBQ96PL2 329 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 HIST1H2AAQ96QV6 131 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 DIRC2Q96SL1 478 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 CCL19Q99731 98 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 VRK1Q99986 396 aaPredicted RBP13.77□□□□□ -0.21
VHL-203ENST00000477538 CACNG6Q9BXT2 260 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 PPIL3Q9H2H8 161 aaKnown RBP13.77□□□□□ -0.21
VHL-203ENST00000477538 TPK1Q9H3S4 243 aa13.77□□□□□ -0.21
VHL-203ENST00000477538 TRAV8-7A0A075B6U6 113 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 F5H5P2 479 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 ADH4P08319 380 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 OCMP0CE72 109 aaPredicted RBP13.76□□□□□ -0.21
VHL-203ENST00000477538 IGFBP3P17936 291 aaPredicted RBP13.76□□□□□ -0.21
VHL-203ENST00000477538 ATF1P18846 271 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 RAB3AP20336 220 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 TNFSF4P23510 183 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 CALRP27797 417 aaKnown RBP13.76□□□□□ -0.21
VHL-203ENST00000477538 KRTAP10-9P60411 292 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 PPP3R1P63098 170 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 CNN3Q15417 329 aaKnown RBP13.76□□□□□ -0.21
VHL-203ENST00000477538 CEACAM21Q3KPI0 293 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 ZNF529Q6P280 563 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 GDPGP1Q6ZNW5 385 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 SPERTQ8NA61 448 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 OR1M1Q8NGA1 313 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 TRMT10AQ8TBZ6 339 aaKnown RBP13.76□□□□□ -0.21
VHL-203ENST00000477538 NPRL2Q8WTW4 380 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 MICU1Q9BPX6 476 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 RTL8AQ9BWD3 113 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 LIME1Q9H400 295 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 TCF7L1Q9HCS4 588 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 NKIRAS2Q9NYR9 191 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 FOXJ3Q9UPW0 622 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 SLC7A11Q9UPY5 501 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 GSTK1Q9Y2Q3 226 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
VHL-203ENST00000477538 IGKV1-9A0A0C4DH69 117 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 ALX3O95076 343 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 SRMP19623 302 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 AZGP1P25311 298 aaKnown RBP13.75□□□□□ -0.21
VHL-203ENST00000477538 TNFAIP6P98066 277 aaPredicted RBP13.75□□□□□ -0.21
VHL-203ENST00000477538 MZT1Q08AG7 82 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 SLC16A12Q6ZSM3 486 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 CLVS1Q8IUQ0 354 aaPredicted RBP13.75□□□□□ -0.21
VHL-203ENST00000477538 OR5A2Q8NGI9 324 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 OR51A2Q8NGJ7 313 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 IGFBPL1Q8WX77 278 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 NRGNQ92686 78 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 RNF170Q96K19 258 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 CENPOQ9BU64 300 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 FGF23Q9GZV9 251 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms