RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 GPR137BO60478 399 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 CST4P01036 141 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 CRYBA1P05813 215 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ANXA2P07355 339 aaKnown RBP10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 NAA10P41227 235 aaPredicted RBP10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RASSF2P50749 326 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ASPHD2Q6ICH7 369 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ZNF788Q6ZQV5 615 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SLC36A1Q7Z2H8 476 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 VMO1Q7Z5L0 202 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 TMEM179BQ7Z7N9 219 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ERI1Q8IV48 349 aaKnown RBP10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 IQCF1Q8N6M8 205 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 OR10G2Q8NGC3 310 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 OR6N2Q8NGY6 317 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 OR5P3Q8WZ94 311 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ST8SIA4Q92187 359 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 LYZL4Q96KX0 146 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RAB3IPQ96QF0 476 aaPredicted RBP10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 DCTN5Q9BTE1 182 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 WDR13Q9H1Z4 485 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 OR10A2Q9H208 303 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 C16orf95Q9H693 158 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 HAO2Q9NYQ3 351 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 TAS2R1Q9NYW7 299 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 MPC1Q9Y5U8 109 aa10.06□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RNASEK-C17orf49H0YIS7 233 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GYG2O15488 501 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ATP5HO75947 161 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RAP2AP10114 183 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 HSD11B1P28845 292 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 CDK5Q00535 292 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 IL5RAQ01344 420 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SNCBQ16143 134 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 TAF9Q16594 264 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 FAM98BQ52LJ0 330 aaKnown RBP10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 Q6ZSV7 163 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 FAM216BQ8N7L0 139 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SCCPDHQ8NBX0 429 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ANGPTL6Q8NI99 470 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GIPC3Q8TF64 312 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 HPSE2Q8WWQ2 592 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 DNAJC27Q9NZQ0 273 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ZNRD1Q9P1U0 126 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RNF114Q9Y508 228 aa10.05□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 TMEM210A6NLX4 147 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PRODHO43272 600 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 TSPAN9O75954 239 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 LYNP07948 512 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SELLP14151 372 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 HOXB6P17509 224 aaKnown RBP10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ALOX5APP20292 161 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SLC2A5P22732 501 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 CAV3P56539 151 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PRDX4Q13162 271 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 C17orf107Q6ZR85 190 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PDZD9Q8IXQ8 264 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ADGRG5Q8IZF4 528 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 OR5T2Q8NGG2 359 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 TEX47Q8TBZ9 253 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RPL3LQ92901 407 aaKnown RBP10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ITFG2Q969R8 447 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ASB9Q96DX5 294 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PGAM5Q96HS1 289 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 AJUBAQ96IF1 538 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 LRGUKQ96M69 825 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 MICU1Q9BPX6 476 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 CHID1Q9BWS9 393 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PAPOLGQ9BWT3 736 aaKnown RBP10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ABCB9Q9NP78 766 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ZNF391Q9UJN7 358 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 KLHDC2Q9Y2U9 406 aa10.04□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 A0A0U1RQV5 110 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ACOD1A6NK06 481 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ANXA2P2A6NMY6 339 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ZNF850A8MQ14 1090 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SIGLEC5O15389 551 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 NDUFB3O43676 98 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 SELENOFO60613 162 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 IGLV3-1P01715 115 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 ACAA1P09110 424 aaPredicted RBP10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 H2BFMP0C1H6 154 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GNALP38405 381 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 DLX1P56177 255 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GUCA2AQ02747 115 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GINS1Q14691 196 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 DGUOKQ16854 277 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 LRRC10Q5BKY1 277 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 HCP5Q6MZN7 132 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PLBD1Q6P4A8 553 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 GDPGP1Q6ZNW5 385 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 CPOQ8IVL8 374 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 FTMTQ8N4E7 242 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 OR8B12Q8NGG6 310 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 PKP2Q99959 881 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RBM4BQ9BQ04 359 aaKnown RBP10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 THTPAQ9BU02 230 aa10.03□□□□□ -0.8
MSH5-SAPCD1-205ENST00000476085 RTL8AQ9BWD3 113 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms