RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 DERL3Q96Q80 235 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 VRK1Q99986 396 aaPredicted RBP13.36□□□□□ -0.27
CPSF3-203ENST00000475482 MRPL37Q9BZE1 423 aaKnown RBP13.36□□□□□ -0.27
CPSF3-203ENST00000475482 RAB1BQ9H0U4 201 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 OR10A2Q9H208 303 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 MMP27Q9H306 513 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 TCF7L1Q9HCS4 588 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 SNTG1Q9NSN8 517 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 CKLFQ9UBR5 152 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 DNHD1Q96M86 4753 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 A0A0U1RQV5 110 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 TMEM127O75204 238 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 MTRF1O75570 445 aaKnown RBP13.35□□□□□ -0.27
CPSF3-203ENST00000475482 TTRP02766 147 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 GIFP27352 417 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 RPS19P39019 145 aaKnown RBP13.35□□□□□ -0.27
CPSF3-203ENST00000475482 NR4A2P43354 598 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 PSMD7P51665 324 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 ODF4Q2M2E3 257 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 ZNF404Q494X3 552 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 COMMD2Q86X83 199 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 ZCCHC24Q8N2G6 241 aaKnown RBP13.35□□□□□ -0.27
CPSF3-203ENST00000475482 OR13C3Q8NGS6 347 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 OR13C5Q8NGS8 318 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 AKR7LQ8NHP1 331 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 MCFD2Q8NI22 146 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 ITFG2Q969R8 447 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 TMEM106AQ96A25 262 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 RGCCQ9H4X1 137 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 COL6A5A8TX70 2615 aa13.35□□□□□ -0.27
CPSF3-203ENST00000475482 SYT7O43581 403 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 ACSM4P0C7M7 580 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 SRMP19623 302 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 STOMP27105 288 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 APLNRP35414 380 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 MXD1Q05195 221 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 LSAMPQ13449 338 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 INSL4Q14641 139 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 KRTAP27-1Q3LI81 207 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 DOK3Q7L591 496 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
CPSF3-203ENST00000475482 OR1J2Q8NGS2 313 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 RGP1Q92546 391 aaPredicted RBP13.34□□□□□ -0.27
CPSF3-203ENST00000475482 TPK1Q9H3S4 243 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 NOX4Q9NPH5 578 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 YAE1D1Q9NRH1 226 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 TMEM160Q9NX00 188 aa13.34□□□□□ -0.27
CPSF3-203ENST00000475482 TRBV5-7A0A0A0MS05 114 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 A8MV72 311 aaPredicted RBP13.33□□□□□ -0.28
CPSF3-203ENST00000475482 KIAA1324LA8MWY0 1029 aaPredicted RBP13.33□□□□□ -0.28
CPSF3-203ENST00000475482 P2RY10O00398 339 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 TBX1O43435 398 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 LCATP04180 440 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 RAB3BP20337 219 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 S100A5P33763 92 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 RANBP1P43487 201 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 SOX2P48431 317 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 RPS23P62266 143 aaKnown RBP13.33□□□□□ -0.28
CPSF3-203ENST00000475482 PRSS45Q7RTY3 260 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 RDH10Q8IZV5 341 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 SLC30A7Q8NEW0 376 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 OR8B12Q8NGG6 310 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 PIMREGQ9BSJ6 248 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 SLIRPQ9GZT3 109 aaKnown RBP13.33□□□□□ -0.28
CPSF3-203ENST00000475482 FOXJ3Q9UPW0 622 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 N6AMT1Q9Y5N5 214 aa13.33□□□□□ -0.28
CPSF3-203ENST00000475482 IGLV3-9A0A075B6K5 115 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 A0A075B6Q4 140 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 IGHV4-61A0A0C4DH41 118 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 MEGF11A6BM72 1044 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 J3QW42 95 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 M0R233 179 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 XRCC2O43543 280 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 SLC2A1P11166 492 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 DAOP14920 347 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 ZNF20P17024 532 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 CCL1P22362 96 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
CPSF3-203ENST00000475482 RIN1Q13671 783 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 TBC1D28Q2M2D7 210 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 RSPO1Q2MKA7 263 aaPredicted RBP13.32□□□□□ -0.28
CPSF3-203ENST00000475482 MZT2AQ6P582 158 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 UNQ6126/PRO20091Q6UXV3 157 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 SERPINA12Q8IW75 414 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 CPEB3Q8NE35 698 aaKnown RBP13.32□□□□□ -0.28
CPSF3-203ENST00000475482 OR51E1Q8TCB6 317 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 ACOT12Q8WYK0 555 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 KCTD12Q96CX2 325 aaKnown RBP13.32□□□□□ -0.28
CPSF3-203ENST00000475482 C10orf35Q96D05 121 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 BPESC1Q9GZL8 116 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 PLEKHA1Q9HB21 404 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 PEX16Q9Y5Y5 336 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 SVEP1Q4LDE5 3571 aa13.32□□□□□ -0.28
CPSF3-203ENST00000475482 CUBNO60494 3623 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms