RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 AMY2BP19961 511 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 HSD11B1P28845 292 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 RPS27P42677 84 aaKnown RBP10.24□□□□□ -0.77
SKA3-206ENST00000475251 ENTPD1P49961 510 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 LGALS4P56470 323 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 SPIBQ01892 262 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.24□□□□□ -0.77
SKA3-206ENST00000475251 DGUOKQ16854 277 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 RPL13AP3Q6NVV1 102 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 LYG1Q8N1E2 194 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 OR5T2Q8NGG2 359 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 OR52L1Q8NGH7 329 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 OR52H1Q8NGJ2 320 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 OR52J3Q8NH60 311 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 RORBQ92753 470 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 RCN3Q96D15 328 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 REEP6Q96HR9 211 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 DHRS1Q96LJ7 313 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 GAFA1Q96PS6 74 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 NKX3-1Q99801 234 aaPredicted RBP10.24□□□□□ -0.77
SKA3-206ENST00000475251 HOPXQ9BPY8 73 aaPredicted RBP10.24□□□□□ -0.77
SKA3-206ENST00000475251 HEXA-AS1Q9H8Q6 139 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 SNTG1Q9NSN8 517 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 SAMD4AQ9UPU9 718 aaKnown RBP10.24□□□□□ -0.77
SKA3-206ENST00000475251 MPC1Q9Y5U8 109 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 GMNNO75496 209 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 GADD45GO95257 159 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 ALDOBP05062 364 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 ACAA1P09110 424 aaPredicted RBP10.23□□□□□ -0.77
SKA3-206ENST00000475251 CD28P10747 220 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 SELLP14151 372 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 FMO3P31513 532 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 PYCR1P32322 319 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 CX3CR1P49238 355 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 ARSJQ5FYB0 599 aaPredicted RBP10.23□□□□□ -0.77
SKA3-206ENST00000475251 Q8N2B8 174 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 ANGPTL6Q8NI99 470 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 RP9Q8TA86 221 aaKnown RBP10.23□□□□□ -0.77
SKA3-206ENST00000475251 C17orf50Q8WW18 174 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 SEH1LQ96EE3 360 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 KCTD14Q9BQ13 255 aaPredicted RBP10.23□□□□□ -0.77
SKA3-206ENST00000475251 OCSTAMPQ9BR26 566 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 OR10A2Q9H208 303 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 RGCCQ9H4X1 137 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 SERTAD4Q9NUC0 356 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 NLKQ9UBE8 527 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 PITPNC1Q9UKF7 332 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 COMMD3-BMI1R4GMX3 469 aa10.23□□□□□ -0.77
SKA3-206ENST00000475251 hCG_38984A0A1B0GV85 526 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 TVP23AA6NH52 213 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 OR2AT4A6NND4 320 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 NME4O00746 187 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 CHST1O43916 411 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 ANOS1P23352 680 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 GSK3AP49840 483 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 BMXP51813 675 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 BLVRAP53004 296 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 GMFBP60983 142 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 MXRA7P84157 204 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 TEX30Q5JUR7 227 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 SLC35F1Q5T1Q4 408 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 ZBTB37Q5TC79 503 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 HCP5Q6MZN7 132 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 KCTD8Q6ZWB6 473 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 FAM185AQ8N0U4 392 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 OR5K1Q8NHB7 308 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 SGK3Q96BR1 496 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 C7orf34Q96L11 122 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 CITED2Q99967 270 aaPredicted RBP10.22□□□□□ -0.77
SKA3-206ENST00000475251 FUZQ9BT04 418 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 PRSS22Q9GZN4 317 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 WDR13Q9H1Z4 485 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 ABCB10Q9NRK6 738 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 LRP12Q9Y561 859 aa10.22□□□□□ -0.77
SKA3-206ENST00000475251 VGLL3A8MV65 326 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 ZNF593O00488 134 aaPredicted RBP10.21□□□□□ -0.77
SKA3-206ENST00000475251 AKR7A2O43488 359 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.77
SKA3-206ENST00000475251 GLRA1P23415 457 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 GABRA2P47869 451 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 SLC35A2P78381 396 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 TSPAN31Q12999 210 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 CNN3Q15417 329 aaKnown RBP10.21□□□□□ -0.77
SKA3-206ENST00000475251 TMEM185AQ8NFB2 350 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 GNPDA2Q8TDQ7 276 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 RPL3LQ92901 407 aaKnown RBP10.21□□□□□ -0.77
SKA3-206ENST00000475251 FOXRED1Q96CU9 486 aaPredicted RBP10.21□□□□□ -0.77
SKA3-206ENST00000475251 AJUBAQ96IF1 538 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 WWC2-AS2Q96NR7 200 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 GMPR2Q9P2T1 348 aaKnown RBP10.21□□□□□ -0.77
SKA3-206ENST00000475251 TCF19Q9Y242 345 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 RHBDD3Q9Y3P4 386 aa10.21□□□□□ -0.77
SKA3-206ENST00000475251 H3BUI4 141 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 DIRAS1O95057 198 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 VSIG8P0DPA2 414 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 PF4V1P10720 104 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 IGLL1P15814 213 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms