RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CDH24Q86UP0 819 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 SATL1Q86VE3 508 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 LRP11Q86VZ4 500 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 CLVS1Q8IUQ0 354 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-216ENST00000468949 PNLDC1Q8NA58 520 aaKnown RBP6.95□□□□□ -1.3
HDAC6-216ENST00000468949 SPERTQ8NA61 448 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 OR2Z1Q8NG97 314 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 OR13C9Q8NGT0 318 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 OR13G1Q8NGZ3 307 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 OR10AC1Q8NH08 325 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 NPRL2Q8WTW4 380 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 RGP1Q92546 391 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-216ENST00000468949 PHYHIPQ92561 330 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 PIGTQ969N2 578 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 ELMOD3Q96FG2 381 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 BORCS8Q96FH0 119 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 KCTD7Q96MP8 289 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 DERL3Q96Q80 235 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 DIRC2Q96SL1 478 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 GPER1Q99527 375 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 CCL19Q99731 98 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 FUNDC2Q9BWH2 189 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 EGLN1Q9GZT9 426 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 NOX4Q9NPH5 578 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 GPR173Q9NS66 373 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF275Q9NSD4 429 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-216ENST00000468949 CBLN4Q9NTU7 201 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 DECR2Q9NUI1 292 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 C14orf119Q9NWQ9 140 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 TAS2R4Q9NYW5 299 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 ZDHHC8Q9ULC8 765 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 ADGRG4Q8IZF6 3080 aa6.95□□□□□ -1.3
HDAC6-216ENST00000468949 IGLV3-9A0A075B6K5 115 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 A0A1W2PPK0 400 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 A6NLC8 198 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 SPRY3O43610 288 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 SULT1B1O43704 296 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 GMDSO60547 372 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 CYB5AP00167 134 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 CST4P01036 141 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 MAS1P04201 325 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 FSTP19883 344 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 PRKACBP22694 351 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 ANOS1P23352 680 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 ACKR3P25106 362 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 LOXP28300 417 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 TGFBR2P37173 567 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 RANBP1P43487 201 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 SRP9P49458 86 aaKnown RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 LSM3P62310 102 aaKnown RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 TNFAIP6P98066 277 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 BLMHQ13867 455 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 PCGF3Q3KNV8 242 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 CEP78Q5JTW2 689 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 LHFPL2Q6ZUX7 228 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 UTS2BQ765I0 119 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 PARP16Q8N5Y8 322 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF611Q8N823 705 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 NKAIN3Q8N8D7 197 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 OR10AD1Q8NGE0 317 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 TRMT10AQ8TBZ6 339 aaKnown RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 RAB2BQ8WUD1 216 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 SPSB1Q96BD6 273 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 YIPF6Q96EC8 236 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 ADAT3Q96EY9 351 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 VRK1Q99986 396 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 SOX7Q9BT81 388 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 RAB1BQ9H0U4 201 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 OR51E2Q9H255 320 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 TPK1Q9H3S4 243 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 MS4A5Q9H3V2 200 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 CXorf56Q9H5V9 222 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 MSL2Q9HCI7 577 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 MYEF2Q9P2K5 600 aaKnown RBP6.94□□□□□ -1.3
HDAC6-216ENST00000468949 FOXJ3Q9UPW0 622 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 LAMP3Q9UQV4 416 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 RHBDD3Q9Y3P4 386 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 ABCA12Q86UK0 2595 aa6.94□□□□□ -1.3
HDAC6-216ENST00000468949 FAM230AA0A1W2PPH8 454 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 MEGF11A6BM72 1044 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 A6NJY4 79 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 OR5B21A6NL26 309 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 LMX1BO60663 402 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 GABARAPO95166 117 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 UCHL1P09936 223 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 NAT2P11245 290 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 ATF1P18846 271 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 TNFRSF1AP19438 455 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 AZGP1P25311 298 aaKnown RBP6.93□□□□□ -1.3
HDAC6-216ENST00000468949 BDKRB2P30411 391 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 PPOXP50336 477 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 GPM6AP51674 278 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 ATP1B3P54709 279 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 RPS11P62280 158 aaKnown RBP eCLIP6.93□□□□□ -1.3
HDAC6-216ENST00000468949 GNG3P63215 75 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 INSL4Q14641 139 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 TESK1Q15569 626 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 CEACAM21Q3KPI0 293 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 FAM209AQ5JX71 171 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms