RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FLT4P35916 1363 aa3.08□□□□□ -1.92
LSM5-209ENST00000468872 COL5A3P25940 1745 aaPredicted RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 ANKRD26Q9UPS8 1709 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 NBEAL1Q6ZS30 2694 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 PCNX1Q96RV3 2341 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 ARPC4-TTLL3A0A0A6YYG9 625 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 A6NDN8 102 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 GABRPO00591 440 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 ZBTB5O15062 677 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 SIVA1O15304 175 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 NVLO15381 856 aaKnown RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 CCL5P13501 91 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 IGFBP3P17936 291 aaPredicted RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 CCT6AP40227 531 aaKnown RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 MAGEA1P43355 309 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 ZNF266Q14584 549 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 SHHQ15465 462 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 CHRFAM7AQ494W8 412 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 HIKESHIQ53FT3 197 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 PLCXD3Q63HM9 321 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 PRMT9Q6P2P2 845 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 ANGPTL8Q6UXH0 198 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 FAM122BQ7Z309 247 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 CBR4Q8N4T8 237 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 OR6Q1Q8NGQ2 317 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 ISG20Q96AZ6 181 aaKnown RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 RNF145Q96MT1 663 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 FOPNLQ96NB1 174 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 NDFIP1Q9BT67 221 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 C8orf33Q9H7E9 229 aaPredicted RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 ZNF430Q9H8G1 570 aaPredicted RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 RPRD1BQ9NQG5 326 aaKnown RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 FBN1P35555 2871 aaKnown RBP3.07□□□□□ -1.92
LSM5-209ENST00000468872 E9PCH4 1651 aa3.07□□□□□ -1.92
LSM5-209ENST00000468872 OR6C74A6NCV1 312 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 NME4O00746 187 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 RGPD8O14715 1765 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 ZNF324O75467 553 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 MED6O75586 246 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 GCM2O75603 506 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 CTDNEP1O95476 244 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 HPRT1P00492 218 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 CTSLP07711 333 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 POLR2MP0CAP2 368 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 USF1P22415 310 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 SERPINB8P50452 374 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 CLDN18P56856 261 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 ZNF121P58317 390 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 PFN3P60673 137 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 RPS23P62266 143 aaKnown RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 RAB11AP62491 216 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 LOXL1Q08397 574 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 KIR2DS1Q14954 304 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 STK11Q15831 433 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 RAB11BQ15907 218 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 CEP162Q5TB80 1403 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 C16orf87Q6PH81 154 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 HORMAD1Q86X24 394 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 ZNF695Q8IW36 515 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 COX18Q8N8Q8 333 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 SNX31Q8N9S9 440 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 OR51F2Q8NH61 342 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 RPEQ96AT9 228 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 ZNF707Q96C28 371 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 STARD4Q96DR4 205 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 TIMM17AQ99595 171 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 HMG20AQ9NP66 347 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 ZNF355PQ9NSJ1 428 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 SLC39A1Q9NY26 324 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 IGSF9BQ9UPX0 1349 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 YARS2Q9Y2Z4 477 aaKnown RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 RHBDD3Q9Y3P4 386 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 TSSC4Q9Y5U2 329 aaPredicted RBP3.06□□□□□ -1.92
LSM5-209ENST00000468872 NBPF19A0A087WUL8 3843 aa3.06□□□□□ -1.92
LSM5-209ENST00000468872 FER1L6Q2WGJ9 1857 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 ANKRD36BQ8N2N9 1353 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 IGKV2D-24A0A075B6R9 120 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 IGKV1-8A0A0C4DH67 115 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 A0A1W2PRD5 423 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 MAGEB4O15481 346 aaPredicted RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 SCELO95171 688 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 PRB1P04280 392 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 KRT16P08779 473 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 PSMC3P17980 439 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 DTYMKP23919 212 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 IL32P24001 234 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 CD82P27701 267 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 RAB7AP51149 207 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 CDKN2DP55273 166 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 SYNJ2BPP57105 145 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 ART3Q13508 389 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 DGCR6Q14129 220 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 DOC2AQ14183 400 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 GABRA6Q16445 453 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 SNRNP35Q16560 246 aaKnown RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 HADHQ16836 314 aaKnown RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 RPEL1Q2QD12 228 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 KLHL40Q2TBA0 621 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 GCSAMLQ5JQS6 135 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms