RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OGG1O15527 345 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TPD52L2O43399 206 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SYNGR3O43761 229 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 AIREO43918 545 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 NOL3O60936 208 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF254O75437 659 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ACTL6BO94805 426 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CLDN14O95500 239 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 MBPP02686 304 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SERPINA5P05154 406 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 COX5AP20674 150 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 UGT2B10P36537 528 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TGFBR1P36897 503 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 KIR3DL2P43630 455 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 RGS6P49758 472 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ASCL1P50553 236 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TAS2R43P59537 309 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 NANOS3P60323 173 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 HIST1H3AP68431 136 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ECH1Q13011 328 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 MLLT11Q13015 90 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TPBGQ13641 420 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 INSL4Q14641 139 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 PPA1Q15181 289 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TAB1Q15750 504 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SSX1Q16384 188 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TBC1D28Q2M2D7 210 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 RSPO1Q2MKA7 263 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF829Q3KNS6 432 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SLC25A35Q3KQZ1 300 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ACSM3Q53FZ2 586 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 WDR38Q5JTN6 314 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 BCL2L15Q5TBC7 163 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 HIST2H3PS2Q5TEC6 136 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 MTFR2Q6P444 385 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ACSM6Q6P461 480 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 MYO7BQ6PIF6 2116 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 DEGS2Q6QHC5 323 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF788Q6ZQV5 615 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 HIST2H3AQ71DI3 136 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CEACAM19Q7Z692 300 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 MYPOPQ86VE0 399 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CATSPERDQ86XM0 798 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CCDC36Q8IYA8 594 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SYS1Q8N2H4 156 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 PRSS35Q8N3Z0 413 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 PAQR4Q8N4S7 273 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 PNLDC1Q8NA58 520 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SLC30A7Q8NEW0 376 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SEMA6DQ8NFY4 1073 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR52L2PQ8NGH6 319 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR1J2Q8NGS2 313 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR13F1Q8NGS4 319 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR13C5Q8NGS8 318 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR2G2Q8NGZ5 317 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR5AK2Q8NH90 309 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR51E1Q8TCB6 317 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TSEN15Q8WW01 171 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 GLMPQ8WWB7 406 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 HSD17B8Q92506 261 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 NPIPB3Q92617 1050 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 GHSRQ92847 366 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 RPL3LQ92901 407 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 RNASE6Q93091 150 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ORAI1Q96D31 301 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 YIPF6Q96EC8 236 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF799Q96GE5 643 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM71F1Q96KD3 344 aaPredicted RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 C4orf45Q96LM5 186 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 DOCK7Q96N67 2140 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 WFIKKN1Q96NZ8 548 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 COQ7Q99807 217 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 KCNS3Q9BQ31 491 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 PDCD1LG2Q9BQ51 273 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 WACQ9BTA9 647 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 MED18Q9BUE0 208 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 FUNDC2Q9BWH2 189 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 COMMD4Q9H0A8 199 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 HDHD2Q9H0R4 259 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 RNF167Q9H6Y7 350 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ISYNA1Q9NPH2 558 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 B3GNT2Q9NY97 397 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 PTTG3PQ9NZH4 202 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF224Q9NZL3 707 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF319Q9P2F9 582 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 EIF3KQ9UBQ5 218 aaKnown RBP3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 NDRG3Q9UGV2 375 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SSR3Q9UNL2 185 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 AMDHD2Q9Y303 409 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 STARD10Q9Y365 291 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SLC25A15Q9Y619 301 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CEPT1Q9Y6K0 416 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 COL6A6A6NMZ7 2263 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 BSNQ9UPA5 3926 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 FREM1Q5H8C1 2179 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 SHANK1Q9Y566 2161 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ARHGAP21Q5T5U3 1957 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ATRXP46100 2492 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 PKD1L2Q7Z442 2459 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 LOC400499M0QZD8 3231 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms