RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SEMA6AQ9H2E6 1030 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 ONECUT1Q9UBC0 465 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 KPTNQ9Y664 436 aa20.15■□□□□ 0.82
PTCH1-210ENST00000468211 A0A1B0GUS0 222 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 ARRDC5A6NEK1 342 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 ZNF850A8MQ14 1090 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 PRR23D1E9PI22 279 aaPredicted RBP20.14■□□□□ 0.81
PTCH1-210ENST00000468211 LYNP07948 512 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 PRR23D2P0DMB1 279 aaPredicted RBP20.14■□□□□ 0.81
PTCH1-210ENST00000468211 NAA10P41227 235 aaPredicted RBP20.14■□□□□ 0.81
PTCH1-210ENST00000468211 IER3P46695 156 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 TGM4P49221 684 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 IKZF1Q13422 519 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 STUMQ69YW2 141 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 SCCPDHQ8NBX0 429 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 BBS1Q8NFJ9 593 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 CANT1Q8WVQ1 401 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 OR5P3Q8WZ94 311 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 LRGUKQ96M69 825 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 MICU1Q9BPX6 476 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 SIRT7Q9NRC8 400 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 SNTG1Q9NSN8 517 aa20.14■□□□□ 0.81
PTCH1-210ENST00000468211 PRPF19Q9UMS4 504 aaKnown RBP20.14■□□□□ 0.81
PTCH1-210ENST00000468211 CLPSL1A2RUU4 121 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 GPR137BO60478 399 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 PAICSP22234 425 aaKnown RBP20.13■□□□□ 0.81
PTCH1-210ENST00000468211 IL5RAQ01344 420 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 GK3PQ14409 553 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 ATPAF1Q5TC12 328 aaPredicted RBP20.13■□□□□ 0.81
PTCH1-210ENST00000468211 SLC36A1Q7Z2H8 476 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 LDLRAD3Q86YD5 345 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.13■□□□□ 0.81
PTCH1-210ENST00000468211 CPOQ8IVL8 374 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 Q8N7P7 452 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 OR8B12Q8NGG6 310 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 TBC1D15Q8TC07 691 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 HPSE2Q8WWQ2 592 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 C12orf43Q96C57 262 aaKnown RBP20.13■□□□□ 0.81
PTCH1-210ENST00000468211 PKP2Q99959 881 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 RGCCQ9H4X1 137 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 HAO2Q9NYQ3 351 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 MPC1Q9Y5U8 109 aa20.13■□□□□ 0.81
PTCH1-210ENST00000468211 ANXA2P2A6NMY6 339 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 NDUFB3O43676 98 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 PRKACGP22612 351 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 HCCSP53701 268 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 C17orf107Q6ZR85 190 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 PIGCQ92535 297 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 DYRK2Q92630 601 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 RAB3IPQ96QF0 476 aaPredicted RBP20.12■□□□□ 0.81
PTCH1-210ENST00000468211 CITED1Q99966 193 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 DCTN5Q9BTE1 182 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 RTL8AQ9BWD3 113 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 DNAJB11Q9UBS4 358 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 TGP01266 2768 aa20.12■□□□□ 0.81
PTCH1-210ENST00000468211 A0A1B0GVI7 797 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 RNASEK-C17orf49H0YIS7 233 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 AKR7A2O43488 359 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 CST4P01036 141 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 DCTDP32321 178 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 CDK5Q00535 292 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 TMEM236Q5W0B7 351 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 ZNF454Q8N9F8 522 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 OR10Z1Q8NGY1 313 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 THTPAQ9BU02 230 aa20.11■□□□□ 0.81
PTCH1-210ENST00000468211 NOTCH1P46531 2555 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 PRODHO43272 600 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 OSMP13725 252 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 ALOX5APP20292 161 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 SLC2A5P22732 501 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 PSMA6P60900 246 aaKnown RBP20.1■□□□□ 0.81
PTCH1-210ENST00000468211 DEFA6Q01524 100 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 KLRD1Q13241 179 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 TAF9Q16594 264 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 DGUOKQ16854 277 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 FAM76BQ5HYJ3 339 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 ZNF788Q6ZQV5 615 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 FTMTQ8N4E7 242 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 CCDC197Q8NCU1 140 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 LINC01006Q8NI28 216 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 RNF170Q96K19 258 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 GAFA1Q96PS6 74 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 ZNF391Q9UJN7 358 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 LRP12Q9Y561 859 aa20.1■□□□□ 0.81
PTCH1-210ENST00000468211 A0A1W2PRD5 423 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 A0A1W2PRF3 423 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 A0A1W2PRM7 423 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 TMEM210A6NLX4 147 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 GNGT2O14610 69 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 FAM107AO95990 144 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 SNCBQ16143 134 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 LRRC10Q5BKY1 277 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 DMRTC1Q5HYR2 192 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 BRICD5Q6PL45 260 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 METAP1DQ6UB28 335 aaPredicted RBP20.09■□□□□ 0.81
PTCH1-210ENST00000468211 KCTD8Q6ZWB6 473 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 PNKDQ8N490 385 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 ANGPTL6Q8NI99 470 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 C8orf46Q8TAG6 207 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 H1FXQ92522 213 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms