RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TWF2Q6IBS0 349 aaKnown RBP1.6□□□□□ -2.15
SMC4-207ENST00000467263 RAB43Q86YS6 212 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 GABRG1Q8N1C3 465 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 OR4C13Q8NGP0 309 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 OR52E5Q8NH55 327 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 CMTM2Q8TAZ6 248 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 IGF2BP2-AS1Q96M15 143 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 OR2V2Q96R30 315 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 CHP1Q99653 195 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 GEMIN7Q9H840 131 aaKnown RBP1.6□□□□□ -2.15
SMC4-207ENST00000467263 PARP11Q9NR21 331 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 SLC22A7Q9Y694 548 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 BAHCC1Q9P281 2608 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 ZBED9Q6R2W3 1325 aa1.6□□□□□ -2.15
SMC4-207ENST00000467263 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 GOLGA6L4A6NEF3 574 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 DNALI1O14645 258 aaPredicted RBP1.59□□□□□ -2.15
SMC4-207ENST00000467263 PSPHP1O15172 72 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 ERI3O43414 337 aaKnown RBP1.59□□□□□ -2.15
SMC4-207ENST00000467263 CCDC22O60826 627 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 CDH16O75309 829 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 IL3RAP26951 378 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 SLC1A2P43004 574 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 OR1G1P47890 313 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 AP1S2P56377 157 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 MERTKQ12866 999 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 OR2T5Q6IEZ7 315 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 MORN3Q6PF18 240 aaPredicted RBP1.59□□□□□ -2.15
SMC4-207ENST00000467263 TMEM220Q6QAJ8 160 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 WDR82Q6UXN9 313 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 UNC93AQ86WB7 457 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 LY6G5BQ8NDX9 201 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 OR2T29Q8NH02 315 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 MCUR1Q96AQ8 359 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 GPR21Q99679 349 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 VSIRQ9H7M9 311 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 MCTS1Q9ULC4 181 aaKnown RBP1.59□□□□□ -2.15
SMC4-207ENST00000467263 ZNF257Q9Y2Q1 563 aa1.59□□□□□ -2.15
SMC4-207ENST00000467263 IZUMO1RA6ND01 250 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 SDHAF1A6NFY7 115 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 BCKDKO14874 412 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 ERLIN1O75477 346 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 TDP2O95551 362 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 IGHG2P01859 326 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 HLA-HP01893 362 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 IFNW1P05000 195 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 THRAP10827 490 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 KLF3P57682 345 aaPredicted RBP1.58□□□□□ -2.16
SMC4-207ENST00000467263 KDSRQ06136 332 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 ZNF33AQ06730 810 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 TFDP2Q14188 446 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 OR1Q1Q15612 314 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 ZNF141Q15928 474 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 SPANXN2Q5MJ10 180 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 CPTPQ5TA50 214 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 LIN9Q5TKA1 542 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 HHATQ5VTY9 493 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 RWDD4Q6NW29 188 aaKnown RBP1.58□□□□□ -2.16
SMC4-207ENST00000467263 LUZP2Q86TE4 346 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 PDPNQ86YL7 162 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 MUC7Q8TAX7 377 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 ACTL9Q8TC94 416 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 RXFP2Q8WXD0 754 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 RBPMSQ93062 196 aaKnown RBP1.58□□□□□ -2.16
SMC4-207ENST00000467263 OTUB2Q96DC9 234 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 ALS2CR12Q96Q35 445 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 VWA8A3KMH1 1905 aa1.58□□□□□ -2.16
SMC4-207ENST00000467263 KCNE1BA0A087WTH5 132 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 C15orf65H3BRN8 121 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 AQP9O43315 295 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 CTNSO60931 367 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 FCN3O75636 299 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 AGTP01019 485 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 KRT16P08779 473 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 FMODQ06828 376 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 HADHQ16836 314 aaKnown RBP1.57□□□□□ -2.16
SMC4-207ENST00000467263 KLHL40Q2TBA0 621 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 LDLRAD2Q5SZI1 272 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 FAM104BQ5XKR9 115 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 EIF3MQ7L2H7 374 aaKnown RBP1.57□□□□□ -2.16
SMC4-207ENST00000467263 OR4D6Q8NGJ1 314 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 ZNF420Q8TAQ5 688 aaPredicted RBP1.57□□□□□ -2.16
SMC4-207ENST00000467263 ASZ1Q8WWH4 475 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 YIPF6Q96EC8 236 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 KLF6Q99612 283 aaPredicted RBP1.57□□□□□ -2.16
SMC4-207ENST00000467263 FBXO8Q9NRD0 319 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 HEBP1Q9NRV9 189 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 NMRK1Q9NWW6 199 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 SAR1BQ9Y6B6 198 aa1.57□□□□□ -2.16
SMC4-207ENST00000467263 SORL1Q92673 2214 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 IGLV10-54A0A075B6I4 117 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 KCNK2O95069 426 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 OR5AC1P0C628 307 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 CXCR1P25024 350 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 OR12D2P58182 307 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 OR2B8PP59922 312 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 GABRA6Q16445 453 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 PDZD11Q5EBL8 140 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 ZNF470Q6ECI4 717 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 FA2HQ7L5A8 372 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms