RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MPC1Q9Y5U8 109 aa15.78■□□□□ 0.12
COL9A3-206ENST00000466532 ZNF850A8MQ14 1090 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 PRR23D1E9PI22 279 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-206ENST00000466532 SELENOFO60613 162 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 PRR23D2P0DMB1 279 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-206ENST00000466532 POU1F1P28069 291 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 IER3P46695 156 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 DEFA6Q01524 100 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 PRDX4Q13162 271 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 STUMQ69YW2 141 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 PLBD1Q6P4A8 553 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 CMTM4Q8IZR5 234 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 OR5T2Q8NGG2 359 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 OTOSQ8NHW6 89 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 ASB9Q96DX5 294 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 CITED1Q99966 193 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 SIRT7Q9NRC8 400 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 HAO2Q9NYQ3 351 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 DNAJB11Q9UBS4 358 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 FAM96BQ9Y3D0 163 aa15.77■□□□□ 0.12
COL9A3-206ENST00000466532 ARRDC5A6NEK1 342 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 GPR37O15354 613 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 AMY2BP19961 511 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 CALB2P22676 271 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 ACKR3P25106 362 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 LRRC10Q5BKY1 277 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 KCTD8Q6ZWB6 473 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 OR10Z1Q8NGY1 313 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 RPL3LQ92901 407 aaKnown RBP15.76■□□□□ 0.11
COL9A3-206ENST00000466532 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
COL9A3-206ENST00000466532 DMRTB1Q96MA1 342 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 CCT8L2Q96SF2 557 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 CHID1Q9BWS9 393 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 WDR13Q9H1Z4 485 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 SNTG1Q9NSN8 517 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 RNF114Q9Y508 228 aa15.76■□□□□ 0.11
COL9A3-206ENST00000466532 NKX6-3A6NJ46 265 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 TMEM210A6NLX4 147 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 GNGT2O14610 69 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 CST4P01036 141 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 SELLP14151 372 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 TGM4P49221 684 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 PRB3Q04118 309 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-206ENST00000466532 GINS1Q14691 196 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 ATPAF1Q5TC12 328 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-206ENST00000466532 METAP1DQ6UB28 335 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-206ENST00000466532 TMEM179BQ7Z7N9 219 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 ZNF454Q8N9F8 522 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 OR5P3Q8WZ94 311 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 H1FXQ92522 213 aaKnown RBP15.75■□□□□ 0.11
COL9A3-206ENST00000466532 PIGCQ92535 297 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 CLPTM1LQ96KA5 538 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 RAB3IPQ96QF0 476 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-206ENST00000466532 PKP2Q99959 881 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 DCTN5Q9BTE1 182 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 DNTTIP1Q9H147 329 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 SEMA6AQ9H2E6 1030 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 DPAGT1Q9H3H5 408 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 ABCB9Q9NP78 766 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 TAS2R1Q9NYW7 299 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 CAB39Q9Y376 341 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-206ENST00000466532 WNK1Q9H4A3 2382 aa15.75■□□□□ 0.11
COL9A3-206ENST00000466532 VWFP04275 2813 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 PRODHO43272 600 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 AKR7A2O43488 359 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 FBP1P09467 338 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 KRTAP10-3P60369 221 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 PSMA6P60900 246 aaKnown RBP15.74■□□□□ 0.11
COL9A3-206ENST00000466532 GUCA2AQ02747 115 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 PDLIM3Q53GG5 364 aaPredicted RBP15.74■□□□□ 0.11
COL9A3-206ENST00000466532 GDPGP1Q6ZNW5 385 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 ADGRG5Q8IZF4 528 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 OR8B12Q8NGG6 310 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 LINC01006Q8NI28 216 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 NPRL2Q8WTW4 380 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 LRTOMTQ8WZ04 291 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 RNF170Q96K19 258 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 LYZL4Q96KX0 146 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 ZNF391Q9UJN7 358 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 KLHDC2Q9Y2U9 406 aa15.74■□□□□ 0.11
COL9A3-206ENST00000466532 A0A1W2PRD5 423 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 A0A1W2PRF3 423 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 A0A1W2PRM7 423 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 RNASEK-C17orf49H0YIS7 233 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 M0QZ24 198 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 TFF1P04155 84 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 EEF1B2P24534 225 aaKnown RBP15.73■□□□□ 0.11
COL9A3-206ENST00000466532 DLX1P56177 255 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 RPS7P62081 194 aaKnown RBP15.73■□□□□ 0.11
COL9A3-206ENST00000466532 OCLNQ16625 522 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 MIDNQ504T8 468 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 ZNF788Q6ZQV5 615 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 CPOQ8IVL8 374 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 ZDHHC23Q8IYP9 409 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 Q8N7P7 452 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 C8orf46Q8TAG6 207 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 HPSE2Q8WWQ2 592 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 MED30Q96HR3 178 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 GAFA1Q96PS6 74 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 FGF23Q9GZV9 251 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms