RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 V9GYS6 101 aa9.8□□□□□ -0.84
CUX1-207ENST00000465461 A0A1B0GVI7 797 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 hCG_1807616A0A1W2PRN6 198 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ANXA2P2A6NMY6 339 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 CDIPTO14735 213 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 SYT7O43581 403 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 MTRF1O75570 445 aaKnown RBP9.79□□□□□ -0.84
CUX1-207ENST00000465461 TGFAP01135 160 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 IRF2P14316 349 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 EGR1P18146 543 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 GZMKP49863 264 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 GPM6AP51674 278 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 SEC61A1P61619 476 aaKnown RBP9.79□□□□□ -0.84
CUX1-207ENST00000465461 BTG1P62324 171 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ACTA2P62736 377 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ACTG2P63267 376 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ST3GAL4Q11206 333 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ZNF154Q13106 437 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ALKBH1Q13686 389 aaKnown RBP9.79□□□□□ -0.84
CUX1-207ENST00000465461 PLCXD3Q63HM9 321 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 XAF1Q6GPH4 301 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 AHSA2Q719I0 299 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 DOK3Q7L591 496 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 KCTD20Q7Z5Y7 419 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 LRRC28Q86X40 367 aaPredicted RBP9.79□□□□□ -0.84
CUX1-207ENST00000465461 ZDHHC23Q8IYP9 409 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 SPERTQ8NA61 448 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 OR11L1Q8NGX0 322 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 SGCDQ92629 289 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 SEH1LQ96EE3 360 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 TMEM80Q96HE8 168 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 MICU1Q9BPX6 476 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 TMEM165Q9HC07 324 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 INPP5EQ9NRR6 644 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 C14orf119Q9NWQ9 140 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 PSORS1C1Q9UIG5 152 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ENPP5Q9UJA9 477 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 NOP16Q9Y3C1 178 aaKnown RBP9.79□□□□□ -0.84
CUX1-207ENST00000465461 MPC1Q9Y5U8 109 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 CSPG4Q6UVK1 2322 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 ABCA1O95477 2261 aa9.79□□□□□ -0.84
CUX1-207ENST00000465461 PPIAL4EA0A075B759 164 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 IGHV3OR15-7A0A075B7D8 119 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 LOC107986453A0A1B0GWG9 222 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 LRRC30A6NM36 301 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 ZNF732B4DXR9 585 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 PPIAL4DF5H284 164 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 H0YJX3 145 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 PTBP3O95758 552 aaKnown RBP9.78□□□□□ -0.84
CUX1-207ENST00000465461 NRASP01111 189 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 IGHV2-5P01817 119 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 PPIAL4FP0DN26 164 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 CCL1P22362 96 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 DCKP27707 260 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 C21orf33P30042 268 aaPredicted RBP9.78□□□□□ -0.84
CUX1-207ENST00000465461 CDH15P55291 814 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 DOC2BQ14184 412 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 C6orf141Q5SZD1 244 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 FDX2Q6P4F2 183 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 LYPD2Q6UXB3 125 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 IL17RELQ6ZVW7 336 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 KLBQ86Z14 1044 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 SYS1Q8N2H4 156 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 FTMTQ8N4E7 242 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 LINC01356Q8N9X3 169 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 SCCPDHQ8NBX0 429 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 OR51A4Q8NGJ6 313 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 TRMT10AQ8TBZ6 339 aaKnown RBP9.78□□□□□ -0.84
CUX1-207ENST00000465461 Q8TCH9 128 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 NPRL2Q8WTW4 380 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 LRRC29Q8WV35 223 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 GATAD2BQ8WXI9 593 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 HPS1Q92902 700 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 HIST1H2AAQ96QV6 131 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 TMEM246Q9BRR3 403 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 RTL8AQ9BWD3 113 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 VCX3BQ9H321 246 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 ERVK-18Q9QC07 812 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 RNF7Q9UBF6 113 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 PCDHB10Q9UN67 800 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 DIMT1Q9UNQ2 313 aaKnown RBP9.78□□□□□ -0.84
CUX1-207ENST00000465461 PPIAL4AQ9Y536 164 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 SIRT4Q9Y6E7 314 aaPredicted RBP9.78□□□□□ -0.84
CUX1-207ENST00000465461 ABCA2Q9BZC7 2435 aa9.78□□□□□ -0.84
CUX1-207ENST00000465461 OR4C45A6NMZ5 311 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 A8MV72 311 aaPredicted RBP9.77□□□□□ -0.85
CUX1-207ENST00000465461 PTGES3LE9PB15 166 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 PLPP2O43688 288 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 RHBDL1O75783 438 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 LALBAP00709 142 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 TFF1P04155 84 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 ATP6V1B1P15313 513 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 MDH2P40926 338 aaKnown RBP9.77□□□□□ -0.85
CUX1-207ENST00000465461 GBX2P52951 348 aaPredicted RBP9.77□□□□□ -0.85
CUX1-207ENST00000465461 MZT1Q08AG7 82 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 SNCBQ16143 134 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 ZNF181Q2M3W8 571 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 CEACAM21Q3KPI0 293 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 CLVS2Q5SYC1 327 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 WDR82Q6UXN9 313 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms