RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 DOPEY1Q5JWR5 2465 aa3.42□□□□□ -1.86
UBR4-209ENST00000465036 ESPL1Q14674 2120 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 A0A1W2PPE3 182 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 GNG14A0A1W2PPG7 69 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 FRG2CA6NGY1 282 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 C17orf51A8MQB3 221 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SERPINE3A8MV23 424 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 NPIPA5E9PKD4 350 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 CLOCKO15516 846 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 STX11O75558 287 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 BPGMP07738 259 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 LINC00032P0C843 101 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SLC35E2P0CK97 266 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 CPMP14384 443 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ZNF24P17028 368 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 EFNA1P20827 205 aaPredicted RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 GTF2E2P29084 291 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 RPL13AP40429 203 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 DNASE1L1P49184 302 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 FHITP49789 147 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 HLCSP50747 726 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SSR4P51571 173 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 XKP51811 444 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 EFNB2P52799 333 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PKNOX1P55347 436 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 BTG1P62324 171 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PAX5Q02548 391 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SERTAD2Q14140 314 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 KIAA0040Q15053 153 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 EBPQ15125 230 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 USF2Q15853 346 aaPredicted RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 NNATQ16517 81 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 TNFAIP8L3Q5GJ75 292 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PIGGQ5H8A4 983 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 C6orf183Q5T699 404 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 OR52E8Q6IFG1 317 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ANKRD26P1Q6NSI1 321 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SLC48A1Q6P1K1 146 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 C3P1Q6ZMU1 363 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 Q71RC1 249 aaPredicted RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 UTS2BQ765I0 119 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 MOB3BQ86TA1 216 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ST13P4Q8IZP2 240 aaPredicted RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 CYP4Z2PQ8N1L4 340 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 TMEM156Q8N614 296 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 FAM86B1Q8N7N1 296 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 TCEANCQ8N8B7 351 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ZNF615Q8N8J6 731 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ST6GALNAC3Q8NDV1 305 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PROKR2Q8NFJ6 384 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 OR5AP2Q8NGF4 316 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 OR4A15Q8NGL6 344 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 OR9A2Q8NGT5 310 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 CDC26Q8NHZ8 85 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 C16orf78Q8WTQ4 265 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 EXOSC8Q96B26 276 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 ASB9Q96DX5 294 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ZNF681Q96N22 645 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 IL4I1Q96RQ9 567 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SLC6A7Q99884 636 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 TMEM109Q9BVC6 243 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PRRG3Q9BZD7 231 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 C20orf27Q9GZN8 174 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 NXF5Q9H1B4 397 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 CENPHQ9H3R5 247 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 TRIM45Q9H8W5 580 aaPredicted RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 CXorf21Q9HAI6 301 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 C3orf14Q9HBI5 128 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 PROK2Q9HC23 129 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 AGPAT4Q9NRZ5 378 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 MAN2C1Q9NTJ4 1040 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 MS4A12Q9NXJ0 267 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 MAT2BQ9NZL9 334 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 YARS2Q9Y2Z4 477 aaKnown RBP3.41□□□□□ -1.86
UBR4-209ENST00000465036 STARD10Q9Y365 291 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 ICE1Q9Y2F5 2266 aa3.41□□□□□ -1.86
UBR4-209ENST00000465036 SPTBN1Q01082 2364 aaKnown RBP3.4□□□□□ -1.86
UBR4-209ENST00000465036 ZGRF1Q86YA3 2104 aa3.4□□□□□ -1.86
UBR4-209ENST00000465036 CSMD2Q7Z408 3487 aa3.4□□□□□ -1.86
UBR4-209ENST00000465036 TRAV6A0A075B6T7 132 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 TRGV8A0A0C4DH27 118 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 TRBV4-1A0A0J9YWV2 114 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 FAM166BA8MTA8 275 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 SNURFLB1AK76 121 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 AZIN1O14977 448 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 RGS16O15492 202 aaPredicted RBP3.4□□□□□ -1.87
UBR4-209ENST00000465036 CDC40O60508 579 aaKnown RBP eCLIP3.4□□□□□ -1.87
UBR4-209ENST00000465036 CBR3O75828 277 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 OR2J3O76001 311 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 TOXO94900 526 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 CLDN1O95832 211 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 DUX4L4P0CJ87 422 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 SDC1P18827 310 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 PGCP20142 388 aa3.4□□□□□ -1.87
UBR4-209ENST00000465036 CCNOP22674 350 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms