RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ARMC10Q8N2F6 343 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 RBPMSQ93062 196 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 ANAPC10Q9UM13 185 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 FLVCR1Q9Y5Y0 555 aa16.37■□□□□ 0.21
TSPAN4-210ENST00000464987 CCDC187A0A096LP49 1063 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 hCG_1807616A0A1W2PRN6 198 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 P04436 131 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 RAC3P60763 192 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 RPS27AP62979 156 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 ZMYND11Q15326 602 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 WIPI1Q5MNZ9 446 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 OR56B1Q8NGI3 324 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 OR6K3Q8NGY3 331 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 LRRC20Q8TCA0 184 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 OR10A2Q9H208 303 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 CRLF2Q9HC73 371 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 PRR13Q9NZ81 148 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 PADI1Q9ULC6 663 aa16.36■□□□□ 0.21
TSPAN4-210ENST00000464987 PINLYPA6NC86 204 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 TUBAL3A6NHL2 446 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 LRRC3CA6NJW4 275 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 KCNAB3O43448 404 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 CXCL13O43927 109 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 MGMTP16455 207 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 PI3P19957 117 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 ACKR3P25106 362 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SRD5A2P31213 254 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 THBS4P35443 961 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 NPY4RP50391 375 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 CLDN15P56746 228 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SRSF4Q08170 494 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 BAMBIQ13145 260 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 ARFRP1Q13795 201 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 DCAF12Q5T6F0 453 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 C11orf87Q6NUJ2 197 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 CT55Q8WUE5 264 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 ASB13Q8WXK3 278 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SGK3Q96BR1 496 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SGCZQ96LD1 299 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 ST6GALNAC5Q9BVH7 336 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 CHST5Q9GZS9 411 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 LOXL2Q9Y4K0 774 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SPEF1Q9Y4P9 236 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 FOXI3A8MTJ6 420 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SNAPC5O75971 98 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 NAT2P11245 290 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 ZNF84P51523 738 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 FAM27BQ5VT28 67 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 ZNF774Q6NX45 483 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 FAM89BQ8N5H3 189 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 PNLDC1Q8NA58 520 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 RELL2Q8NC24 303 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 URM1Q9BTM9 101 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 C5orf66Q9H5L9 145 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 SDHAF2Q9NX18 166 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 COQ3Q9NZJ6 369 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 PCDHGA1Q9Y5H4 931 aa16.35■□□□□ 0.21
TSPAN4-210ENST00000464987 GPR179Q6PRD1 2367 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 ZNF716A6NP11 495 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 SDCBPO00560 298 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TRAPPC6AO75865 159 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 B4GALT1P15291 398 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 CARD18P57730 90 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 MRPS34P82930 218 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TMEM65Q6PI78 240 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TERB2Q8NHR7 220 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TMEM230Q96A57 120 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 PHB2Q99623 299 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 ELL3Q9HB65 397 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 GPR173Q9NS66 373 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 KCNMB2Q9Y691 235 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 B4E171 279 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 EEF1E1-BLOC1S5C9J1V9 151 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TBPP20226 339 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 ACP1P24666 158 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 BLVRBP30043 206 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 CALCRP30988 508 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TSPAN7P41732 249 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 ACER2Q5QJU3 275 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 LPCAT3Q6P1A2 487 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 RHBDD1Q8TEB9 315 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 OCSTAMPQ9BR26 566 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 TNFSF18Q9UNG2 199 aa16.34■□□□□ 0.21
TSPAN4-210ENST00000464987 NCOR1O75376 2440 aa16.33■□□□□ 0.21
TSPAN4-210ENST00000464987 RNF222A6NCQ9 220 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 MFSD2BA6NFX1 497 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 HPNP05981 417 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 UBBP0CG47 229 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 HLA-GP17693 338 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 CRYGSP22914 178 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 CHAF1BQ13112 559 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 PLXDC2Q6UX71 529 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 AKR7LQ8NHP1 331 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 FGFBP3Q8TAT2 258 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 ZNF845Q96IR2 970 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 LINC00052Q96N35 136 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 FBXO9Q9UK97 447 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 GPR132Q9UNW8 380 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 GJE1A6NN92 205 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms