RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SLC35D3Q5M8T2 416 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L9Q6RFH8 374 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-205ENST00000463818 ASRGL1Q7L266 308 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 FTMTQ8N4E7 242 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 PAPD5Q8NDF8 572 aaKnown RBP15.58■□□□□ 0.08
SF3A1-205ENST00000463818 GATAD2BQ8WXI9 593 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 OR5P3Q8WZ94 311 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 PIGCQ92535 297 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 LHX4Q969G2 390 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 FAM71F1Q96KD3 344 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-205ENST00000463818 LYZL4Q96KX0 146 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 RTL8AQ9BWD3 113 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 TEX12Q9BXU0 123 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 NIPAL2Q9H841 368 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 TVP23BQ9NYZ1 205 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4Q9UBX2 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 RPUSD1Q9UJJ7 312 aaKnown RBP15.58■□□□□ 0.08
SF3A1-205ENST00000463818 FAM181BA6NEQ2 426 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 CST4P01036 141 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 MDKP21741 143 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-205ENST00000463818 SLC2A5P22732 501 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 GMFBP60983 142 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 APOFQ13790 326 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 SNAPC1Q16533 368 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 SLC36A1Q7Z2H8 476 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 KRT77Q7Z794 578 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 OR5T2Q8NGG2 359 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 OR8B12Q8NGG6 310 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 RPL3LQ92901 407 aaKnown RBP15.57■□□□□ 0.08
SF3A1-205ENST00000463818 RNF170Q96K19 258 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 SLC25A19Q9HC21 320 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 LAMP5Q9UJQ1 280 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 MGAM2Q2M2H8 2515 aa15.57■□□□□ 0.08
SF3A1-205ENST00000463818 IGHV1-69DA0A0B4J2H0 117 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 NDUFB3O43676 98 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 IGHV1-69P01742 117 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 MELTFP08582 738 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 AMY2BP19961 511 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 TGM4P49221 684 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 FAM76BQ5HYJ3 339 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 PRR31Q5SQ13 230 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 ATPAF1Q5TC12 328 aaPredicted RBP15.56■□□□□ 0.08
SF3A1-205ENST00000463818 FIP1L1Q6UN15 594 aaKnown RBP15.56■□□□□ 0.08
SF3A1-205ENST00000463818 KCTD8Q6ZWB6 473 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 FAM216BQ8N7L0 139 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 OR10Z1Q8NGY1 313 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 C12orf43Q96C57 262 aaKnown RBP15.56■□□□□ 0.08
SF3A1-205ENST00000463818 TEAD3Q99594 435 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 PKP2Q99959 881 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 YIPF3Q9GZM5 350 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 FGF23Q9GZV9 251 aaPredicted RBP15.56■□□□□ 0.08
SF3A1-205ENST00000463818 ZNF696Q9H7X3 374 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 ABCB9Q9NP78 766 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 SNTG1Q9NSN8 517 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 ACOXLQ9NUZ1 547 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 HAO2Q9NYQ3 351 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 LRP12Q9Y561 859 aa15.56■□□□□ 0.08
SF3A1-205ENST00000463818 TMEM210A6NLX4 147 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 CRYBA1P05813 215 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 CRISP1P54107 249 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 PSMA6P60900 246 aaKnown RBP15.55■□□□□ 0.08
SF3A1-205ENST00000463818 IKZF1Q13422 519 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 CDONQ4KMG0 1287 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 PDZD9Q8IXQ8 264 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 TMEM86BQ8N661 226 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 SCCPDHQ8NBX0 429 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 LY6G5BQ8NDX9 201 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 NRBF2Q96F24 287 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 HIST1H2AAQ96QV6 131 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 CHIAQ9BZP6 476 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 WDR13Q9H1Z4 485 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 DNAJB11Q9UBS4 358 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 ZNF391Q9UJN7 358 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 MMP24Q9Y5R2 645 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 KPTNQ9Y664 436 aa15.55■□□□□ 0.08
SF3A1-205ENST00000463818 ACOD1A6NK06 481 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 PSMD9O00233 223 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 GPR37O15354 613 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 AKR7A2O43488 359 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 STUMQ69YW2 141 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 KCTD18Q6PI47 426 aaPredicted RBP15.54■□□□□ 0.08
SF3A1-205ENST00000463818 VMO1Q7Z5L0 202 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 ZDHHC23Q8IYP9 409 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 DUS3LQ96G46 650 aaKnown RBP15.54■□□□□ 0.08
SF3A1-205ENST00000463818 RAB3IPQ96QF0 476 aaPredicted RBP15.54■□□□□ 0.08
SF3A1-205ENST00000463818 SLITRK2Q9H156 845 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 PAPOLBQ9NRJ5 636 aaKnown RBP15.54■□□□□ 0.08
SF3A1-205ENST00000463818 ONECUT1Q9UBC0 465 aa15.54■□□□□ 0.08
SF3A1-205ENST00000463818 TMEM269A0A1B0GVZ9 245 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 CCDC182A6NF36 153 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 MRPL3P09001 348 aaKnown RBP15.53■□□□□ 0.08
SF3A1-205ENST00000463818 MAP2K3P46734 347 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 DAPP51397 102 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 LRRC10Q5BKY1 277 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 DEGS2Q6QHC5 323 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 FAM81AQ8TBF8 368 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 TBC1D15Q8TC07 691 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 SSMEM1Q8WWF3 244 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 HPSE2Q8WWQ2 592 aa15.53■□□□□ 0.08
SF3A1-205ENST00000463818 DMRTB1Q96MA1 342 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms