RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 MRI1Q9BV20 369 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 PAPOLGQ9BWT3 736 aaKnown RBP9.14□□□□□ -0.95
RTF1-202ENST00000462276 NAA50Q9GZZ1 169 aaKnown RBP9.14□□□□□ -0.95
RTF1-202ENST00000462276 PPIL3Q9H2H8 161 aaKnown RBP9.14□□□□□ -0.95
RTF1-202ENST00000462276 MS4A5Q9H3V2 200 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 POFUT1Q9H488 388 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 NKIRAS2Q9NYR9 191 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 ZDHHC8Q9ULC8 765 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 RHBDD3Q9Y3P4 386 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 PRR14LQ5THK1 2151 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 ABCA4P78363 2273 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 A0A1W2PPK0 400 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 NOTOA8MTQ0 251 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 HS3ST1O14792 307 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 ADH4P08319 380 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 RAB3BP20337 219 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 ANOS1P23352 680 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 TNFSF4P23510 183 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 CFPP27918 469 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 SDC2P34741 201 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 SOX6P35712 828 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 MPV17P39210 176 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 RORCP51449 518 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 ERVS71-1P61550 626 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 NCS1P62166 190 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 LSM3P62310 102 aaKnown RBP9.13□□□□□ -0.95
RTF1-202ENST00000462276 DYNC1I2Q13409 638 aaKnown RBP9.13□□□□□ -0.95
RTF1-202ENST00000462276 AGAP6Q5VW22 663 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 VHLLQ6RSH7 139 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 CELF2-AS1Q8N7Q2 184 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 UBASH3BQ8TF42 649 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 PIGCQ92535 297 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 MICU1Q9BPX6 476 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 SOX7Q9BT81 388 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 DCSTAMPQ9H295 470 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 C14orf119Q9NWQ9 140 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 TAS2R4Q9NYW5 299 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 V9GY05 133 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 ROS1P08922 2347 aa9.13□□□□□ -0.95
RTF1-202ENST00000462276 USP9YO00507 2555 aaPredicted RBP9.12□□□□□ -0.95
RTF1-202ENST00000462276 TRAV8-7A0A075B6U6 113 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 A0A1W2PPW3 197 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 TMEM210A6NLX4 147 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 ZNF850A8MQ14 1090 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 H3BSH0 61 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 CTAG2O75638 210 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 CDRT1O95170 752 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 CLDN1O95832 211 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 MAGEB1P43366 347 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 SERPINB10P48595 397 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 RBP2P50120 134 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 MMP15P51511 669 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 ATP1B3P54709 279 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 SCAND1P57086 179 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 GNG3P63215 75 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 PRDX4Q13162 271 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 RIN1Q13671 783 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 UBE2V2Q15819 145 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 NKPD1Q17RQ9 610 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 PCGF3Q3KNV8 242 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 FAM76BQ5HYJ3 339 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 FAM27D1Q5T7N8 215 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 PLCXD3Q63HM9 321 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 LHFPL2Q6ZUX7 228 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 LRRTM1Q86UE6 522 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 ZNF573Q86YE8 665 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 MUC15Q8N387 334 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 ZNF611Q8N823 705 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 OR13C9Q8NGT0 318 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 OR8S1Q8NH09 359 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 OR5P3Q8WZ94 311 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 AP3S1Q92572 193 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 FBXW5Q969U6 566 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 SLC25A46Q96AG3 418 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
RTF1-202ENST00000462276 C14orf79Q96F83 325 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 PSMG3-AS1Q96PY0 264 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 HS3ST6Q96QI5 342 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 RTL8AQ9BWD3 113 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 MRPL37Q9BZE1 423 aaKnown RBP9.12□□□□□ -0.95
RTF1-202ENST00000462276 PCDHB16Q9NRJ7 776 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 TAAR3PQ9P1P4 343 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 GHRLQ9UBU3 117 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 PLCE1Q9P212 2302 aa9.12□□□□□ -0.95
RTF1-202ENST00000462276 IGKV1-9A0A0C4DH69 117 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 IFITM5A6NNB3 132 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 M0R233 179 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 LMX1BO60663 402 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 CA6P23280 308 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 AZGP1P25311 298 aaKnown RBP9.11□□□□□ -0.95
RTF1-202ENST00000462276 RPS19P39019 145 aaKnown RBP9.11□□□□□ -0.95
RTF1-202ENST00000462276 ZNF81P51508 661 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 MTCP1P56278 107 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 SNRPD2P62316 118 aaKnown RBP9.11□□□□□ -0.95
RTF1-202ENST00000462276 TLE4Q04727 773 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 OR8G1Q15617 311 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 DGUOKQ16854 277 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 CEP78Q5JTW2 689 aa9.11□□□□□ -0.95
RTF1-202ENST00000462276 C1orf100Q5SVJ3 147 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms