RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 NEMFO60524 1076 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 TRBV12-3P01733 135 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 ATP6V0D1P61421 351 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 YWHAEP62258 255 aaKnown RBP2.44□□□□□ -2.02
VBP1-202ENST00000460509 KDSRQ06136 332 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 OR1Q1Q15612 314 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 TSC22D1Q15714 1073 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 MLIPQ5VWP3 458 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 MFSD14CQ5VZR4 134 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 PRSS54Q6PEW0 395 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 C16orf87Q6PH81 154 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 OTUD6AQ7L8S5 288 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 LINC00304Q8N9R0 145 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 FAM184AQ8NB25 1140 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 GPX8Q8TED1 209 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 PIH1D2Q8WWB5 315 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 CSPG4P5Q96PW8 444 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 DEFB129Q9H1M3 183 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 C8orf33Q9H7E9 229 aaPredicted RBP2.44□□□□□ -2.02
VBP1-202ENST00000460509 REEP1Q9H902 201 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 DYRK4Q9NR20 520 aa2.44□□□□□ -2.02
VBP1-202ENST00000460509 KIF27Q86VH2 1401 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 HACD1B0YJ81 288 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 PRAMEF26H0Y7S4 382 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 MFNGO00587 321 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 SPOPO43791 374 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 NTF3P20783 257 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 TGFBR1P36897 503 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 ETV1P50549 477 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 OR2B8PP59922 312 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 IL15RAQ13261 267 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 KLHL40Q2TBA0 621 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 TMEM236Q5W0B7 351 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 TTC19Q6DKK2 380 aaPredicted RBP2.43□□□□□ -2.02
VBP1-202ENST00000460509 SGPP2Q8IWX5 399 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 ZNF321PQ8N8H1 164 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 GLYATL2Q8WU03 294 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 RDH12Q96NR8 316 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 AGMATQ9BSE5 352 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 SFXN3Q9BWM7 321 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 CD209Q9NNX6 404 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 TMEM100Q9NV29 134 aa2.43□□□□□ -2.02
VBP1-202ENST00000460509 NDRG2Q9UN36 371 aaKnown RBP2.43□□□□□ -2.02
VBP1-202ENST00000460509 MYL12BO14950 172 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 CTNSO60931 367 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PTTG1O95997 202 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 OTCP00480 354 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 IGLV2-8P01709 118 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 THRAP10827 490 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 RALBP11234 206 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PMCHP20382 165 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PSMD4P55036 377 aaKnown RBP2.42□□□□□ -2.02
VBP1-202ENST00000460509 CLDN18P56856 261 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PPP1CAP62136 330 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 RAB11AP62491 216 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PAFAH1B2P68402 229 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 FLI1Q01543 452 aaPredicted RBP2.42□□□□□ -2.02
VBP1-202ENST00000460509 BTN1A1Q13410 526 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 DOC2AQ14183 400 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 RAB11BQ15907 218 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 C5orf64Q2M2E5 130 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PIP5KL1Q5T9C9 394 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 AADACL4Q5VUY2 407 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 ZNF680Q8NEM1 530 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 OR1S1Q8NH92 325 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 CERS2Q96G23 380 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 Q96MT0 163 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 ALS2CR12Q96Q35 445 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 PEF1Q9UBV8 284 aaKnown RBP2.42□□□□□ -2.02
VBP1-202ENST00000460509 CES1P1Q9UKY3 287 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 SIGLEC7Q9Y286 467 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 ZNF257Q9Y2Q1 563 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 ADGRA3Q8IWK6 1321 aa2.42□□□□□ -2.02
VBP1-202ENST00000460509 LHBP01229 141 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 GABRR2P28476 465 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 MPV17P39210 176 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 GALR1P47211 349 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 CD151P48509 253 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 IDH2P48735 452 aaKnown RBP2.41□□□□□ -2.02
VBP1-202ENST00000460509 CLDN8P56748 225 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 RPS11P62280 158 aaKnown RBP eCLIP2.41□□□□□ -2.02
VBP1-202ENST00000460509 MAD2L1BPQ15013 274 aaPredicted RBP2.41□□□□□ -2.02
VBP1-202ENST00000460509 WDR43Q15061 677 aaKnown RBP eCLIP2.41□□□□□ -2.02
VBP1-202ENST00000460509 NKAIN1Q4KMZ8 207 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 THOC7Q6I9Y2 204 aaKnown RBP2.41□□□□□ -2.02
VBP1-202ENST00000460509 NDUFAF7Q7L592 441 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 PDCL2Q8N4E4 241 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 WDR31Q8NA23 367 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 PROKR2Q8NFJ6 384 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 KLF14Q8TD94 323 aaPredicted RBP2.41□□□□□ -2.02
VBP1-202ENST00000460509 ING5Q8WYH8 240 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 ISG20Q96AZ6 181 aaKnown RBP2.41□□□□□ -2.02
VBP1-202ENST00000460509 TMEM175Q9BSA9 504 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 SHANK2-AS3Q9BTD1 123 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 TDRD3Q9H7E2 651 aaKnown RBP2.41□□□□□ -2.02
VBP1-202ENST00000460509 RHBDD3Q9Y3P4 386 aa2.41□□□□□ -2.02
VBP1-202ENST00000460509 IGKV3D-11A0A0A0MRZ8 115 aa2.4□□□□□ -2.03
VBP1-202ENST00000460509 LINC00854A0A1B0GVQ3 168 aa2.4□□□□□ -2.03
VBP1-202ENST00000460509 OR6C70A6NIJ9 312 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms