RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 C5orf51A6NDU8 294 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 P04436 131 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 GUSBP08236 651 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF93P35789 620 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 DUSP3P51452 185 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 NKAPLQ5M9Q1 402 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 ASB10Q8WXI3 467 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 FAM117AQ9C073 453 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 GPR84Q9NQS5 396 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 METTL1Q9UBP6 276 aaKnown RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 FER1L5A0AVI2 2057 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 BCL2L11O43521 198 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 S100A2P29034 98 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 SHBQ15464 509 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 EXD3Q8N9H8 876 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 MRGPRX4Q96LA9 322 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 ST6GALNAC5Q9BVH7 336 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 SEC11CQ9BY50 192 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 UPB1Q9UBR1 384 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 CARHSP1Q9Y2V2 147 aaKnown RBP13.66□□□□□ -0.22
LMNB1-203ENST00000460265 OR3A2P47893 321 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 SSR4P51571 173 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 BATF2Q8N1L9 274 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 NUBPLQ8TB37 319 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 SLAMF9Q96A28 289 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 PIGQQ9BRB3 760 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 PRRG4Q9BZD6 226 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 CHST6Q9GZX3 395 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 CCSO14618 274 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 AGPAT2O15120 278 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 GNB3P16520 340 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
LMNB1-203ENST00000460265 ANKRD16Q6P6B7 361 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 TRAPPC6BQ86SZ2 158 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 KCNRGQ8N5I3 272 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 GVQW1Q8N7I0 195 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF519Q8TB69 540 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 LIPHQ8WWY8 451 aa13.66□□□□□ -0.22
LMNB1-203ENST00000460265 EEF1E1-BLOC1S5C9J1V9 151 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 CCL3P10147 92 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 AIMP2Q13155 320 aaKnown RBP13.65□□□□□ -0.22
LMNB1-203ENST00000460265 TGIF1Q15583 401 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 CARFQ8N187 725 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
LMNB1-203ENST00000460265 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 TWSG1Q9GZX9 223 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 FBXO4Q9UKT5 387 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 TRBV5-5A0A0J9YX44 114 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 OR2F2O95006 317 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF121P58317 390 aaPredicted RBP13.65□□□□□ -0.22
LMNB1-203ENST00000460265 OR2F1Q13607 317 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 ETV3LQ6ZN32 361 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 OR4D6Q8NGJ1 314 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 RAB3CQ96E17 227 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 ULBP2Q9BZM5 246 aa13.65□□□□□ -0.22
LMNB1-203ENST00000460265 HEXAP06865 529 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 PATE4P0C8F1 98 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF684Q5T5D7 378 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 GLIPR1L1Q6UWM5 242 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 DPPA2Q7Z7J5 298 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 GABRG1Q8N1C3 465 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 CCDC107Q8WV48 283 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 MAFIPQ8WZ33 124 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 ISOC2Q96AB3 205 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 SOX7Q9BT81 388 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 CHRNA10Q9GZZ6 450 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 CNTD2Q9H8S5 307 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF701Q9NV72 531 aaPredicted RBP13.65□□□□□ -0.23
LMNB1-203ENST00000460265 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 PADI1Q9ULC6 663 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 B3GALT1Q9Y5Z6 326 aa13.65□□□□□ -0.23
LMNB1-203ENST00000460265 H7C417 338 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 TNFSF11O14788 317 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 SNRNP70P08621 437 aaKnown RBP13.64□□□□□ -0.23
LMNB1-203ENST00000460265 PGAM2P15259 253 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 SERPINA2P20848 420 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 MSX1P28360 303 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 MOGAT2Q3SYC2 334 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 PIGTQ969N2 578 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 MCHR2Q969V1 340 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 HIST1H2BAQ96A08 127 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 PHYHIPLQ96FC7 376 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 POFUT1Q9H488 388 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 MTFP1Q9UDX5 166 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 DBX1A6NMT0 343 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF878C9JN71 531 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 SLC31A2O15432 143 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 ZNHIT1O43257 154 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 EFNA2O43921 213 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 CX3CR1P49238 355 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 F2RL1P55085 397 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 TAS2R19P59542 299 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms