RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 LRCH1Q9Y2L9 728 aa15.63■□□□□ 0.09
USP39-209ENST00000458268 MPC1Q9Y5U8 109 aa15.63■□□□□ 0.09
USP39-209ENST00000458268 A0A0U1RQV5 110 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 OOEPA6NGQ2 149 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 A6NIN4 97 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 METTL15A6NJ78 407 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 ACOD1A6NK06 481 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 TRAPPC2LH3BP13 241 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 ADAM20O43506 726 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 TTRP02766 147 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 THBS2P35442 1172 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 MTNR1AP48039 350 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 RCN1Q15293 331 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 DCDC5Q6ZRR9 648 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 GCSAMQ8N6F7 178 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 TRUB1Q8WWH5 349 aaKnown RBP15.62■□□□□ 0.09
USP39-209ENST00000458268 MOB1AQ9H8S9 216 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 SNX5Q9Y5X3 404 aa15.62■□□□□ 0.09
USP39-209ENST00000458268 DAPL1A0PJW8 107 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 DCTDP32321 178 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 RIPPLY1Q0D2K3 151 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 KCNJ8Q15842 424 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 LIPNQ5VXI9 398 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 C1orf229Q6ZS94 237 aaPredicted RBP15.61■□□□□ 0.09
USP39-209ENST00000458268 PLPP7Q8NBV4 271 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 ZNF555Q8NEP9 628 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 C22orf15Q8WYQ4 148 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 OR5P3Q8WZ94 311 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 SEH1LQ96EE3 360 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 RASSF4Q9H2L5 321 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 AMBNQ9NP70 447 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 GPR173Q9NS66 373 aa15.61■□□□□ 0.09
USP39-209ENST00000458268 TRAV38-1A0A0B4J264 116 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ZNF732B4DXR9 585 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 J3QLI3 93 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 SRSF10O75494 262 aaKnown RBP15.6■□□□□ 0.09
USP39-209ENST00000458268 MTRF1O75570 445 aaKnown RBP15.6■□□□□ 0.09
USP39-209ENST00000458268 PTBP3O95758 552 aaKnown RBP15.6■□□□□ 0.09
USP39-209ENST00000458268 CST4P01036 141 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 EPHA1P21709 976 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 SNRPGP62308 76 aaKnown RBP15.6■□□□□ 0.09
USP39-209ENST00000458268 ELF3P78545 371 aaPredicted RBP15.6■□□□□ 0.09
USP39-209ENST00000458268 TMED1Q13445 227 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ARMCX4Q5H9R4 360 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 MEDAGQ5VYS4 303 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 LPCAT4Q643R3 524 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 WDR82Q6UXN9 313 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 C11orf53Q8IXP5 236 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ENTHD1Q8IYW4 607 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ELMOD2Q8IZ81 293 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 HPSE2Q8WWQ2 592 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 MRI1Q9BV20 369 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ADI1Q9BV57 179 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 FGF23Q9GZV9 251 aaPredicted RBP15.6■□□□□ 0.09
USP39-209ENST00000458268 PLEKHA1Q9HB21 404 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ABCB9Q9NP78 766 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 SNTG1Q9NSN8 517 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ACOXLQ9NUZ1 547 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 DNAJB11Q9UBS4 358 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 ENPP5Q9UJA9 477 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 AUP1Q9Y679 476 aa15.6■□□□□ 0.09
USP39-209ENST00000458268 IGHV3OR16-10A0A075B7F0 116 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 LOC100130705A0A1B0GUX0 176 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 A0A1B0GVI7 797 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 SNTNA6NMZ2 147 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 AKR7A2O43488 359 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 DHRS3O75911 302 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 GATA3P23771 443 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 ZNF85Q03923 595 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 ZNF91Q05481 1191 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 OCLNQ16625 522 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 BTNL3Q6UXE8 466 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 FAM90A1Q86YD7 464 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 SCCPDHQ8NBX0 429 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 OR5T2Q8NGG2 359 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 NANPQ8TBE9 248 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 NPRL2Q8WTW4 380 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 CYGBQ8WWM9 190 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 TRIM36Q9NQ86 728 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 FAM118AQ9NWS6 357 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 SMPD3Q9NY59 655 aaPredicted RBP15.59■□□□□ 0.09
USP39-209ENST00000458268 ERVK-18Q9QC07 812 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 CTSZQ9UBR2 303 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 INSIG2Q9Y5U4 225 aa15.59■□□□□ 0.09
USP39-209ENST00000458268 TMEM210A6NLX4 147 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 A8MXK9 166 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 TCF21O43680 179 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 NRASP01111 189 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 ZNF12P17014 697 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 ACTC1P68032 377 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 ACTA1P68133 377 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 MICBQ29980 383 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 ZNF684Q5T5D7 378 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 WDR25Q64LD2 544 aaPredicted RBP15.58■□□□□ 0.08
USP39-209ENST00000458268 C1QL2Q7Z5L3 287 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 CATSPERDQ86XM0 798 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 TEX29Q8N6K0 151 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 TRMT10AQ8TBZ6 339 aaKnown RBP15.58■□□□□ 0.08
USP39-209ENST00000458268 ST8SIA4Q92187 359 aa15.58■□□□□ 0.08
USP39-209ENST00000458268 RORBQ92753 470 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms